Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2026 ATGGTTCAAAAACCACTGCAAAACAAAGAAACTAACCCAAGAATAATGGTTGTGATGAACCCAATCTTGGCACTCTCCATTATTACTACCATTTTATTCTTCTCTCCAATGGCTTATTCAGAGAGCAAAGTGGTGAAGAGCGCATTGGTGAGATTCATGGACAATCTTGCACCATGGAATAATAATTCAGAGAGAGAAGCACCAAGGTACTGGGGATGGAACCTTGACACAGATCCATGCGCAGATAACTGGAAAGGTGTGAGTTGTTCCTCAGATGGAAGTGTGAAAGCCATTGTTCTTGATGATTCAAACCTGAGTGGAACCCTAGACGCCACCTCTCTCTGCATGGCGAAATCTCTTCAAATTCTGAGCCTGAAGAGGAACAACTTGCAGGGATCAGTGCCCGAAGCTATCGGAAACTGCAAGTATTTGACCCGTTTGTTCCTCAGCGATAACAACTTCTCCGGTGATCTTCCGATTTCTCTTCAACATTTATGCAGCTTGAGGTGGCTTCATGTTGCCAGAAACAACTTTACCGGTCCCATTTCCGATAAGATACCTGCCTCAGTCTTGATATCCTTTCTCGGTGAGAATAACAAGTTCACTGGGGAGGTACCTGATTTTGACTTCACGAAACTCATTCAATTCAACGTCTCCAACAACAACTTGAAGGGTCAGATTCCTGACGTGAGAAACAAGTTTGGTGTGGAAAGCTTTTTTGGAAATCCTGACTTGTGTGGATCGCCGCTTCCAGCGGCGTGTCCACCTAGTCCCTCACCAAGGAAAGAAAAAAGACTATTTATCACCGACGGCGTGGCGATTTACTCTGGCTACATCATTCTTGGCATCACCGTGGTGGCATTCTTTGTGTACAAGCTAGTGAGGAAATCCATGAACAAAGTGGAAGCATCCAAGGCTCTCAACAAGAAGGAATGCCCAAGGCATCGATTAACTCGTAAGGATCCTGCAGGGGGCAATAATGGTGAAAAGAGCAGGGAGGATTCTTCTGAGAGCAAGGGTAGTGGTCGTGGCGGCGGCCGTGGCAGCGTTGAGATGAGATCAGAGCCATCGATAGCGTCACTTGAGAGTGGAATAACATTGAGCACATCAACGCTGGTAGTTCTGTCAAGCAGGGTATCAAAGGCGCTGAGATTTGAGGACTTGCTGAGAGCACCAGCTGAGTTGATTGGGAGAGGGATGCATGGGAGCCTCTACAAGGTGATGCTGGACAACGGTGTGTTCTTGGCTGTGAAGAGAATCAAGGATTGGGGAATCTCCGAAAGTGATTTTCAGAGGAGAATTGGGAAAGTTAGCCAAGTCAACCATCCATTTGTGTTGCCACCTCTTGCTTACTATTGTTCCCGCCAAGAGAAGCTTCTTGCATATGAGTACATGGACAATGGGAGTCTCTTCAACATGCTCTATAAAGTTGGATCACAAAATGGAAAACCCTTTGAGTGGGGAAGCAGACTAAACATTGCTGCAAAAATAGCAGAAACTTTAGCTTATATGCATGAAGAGCTACGAGAAAGTGGAATAGCACACGGAAACTTAAAATCAAGCAACATTTTATTCAACAACAACATGGAACCATTAATAAGCGAATATGGGCTAATGGTAATTGAACACCAAGCTCTGAGATCACTCTCTCACAGCAAGAGTGTGAGGAACAGGGTTCTAACTGCTGCACATGCATATAGCACCTTCAAAGTTGATGTATACGCCTTTGGGGTGATACTCTTGGAGCTTCTCACAGGGAAAGTGGTTCAGAATCAAGGGGTTTTTGATTTCGTTAAGTGGGTTAATTCTGTGGTTAGAGAGGAGTGGAGTGTTGAAGTGTTTGATAAGAACTTGGTGTCAGAAGGTGCGAGTGGAGAGAGGATGATGAACTTGTTGCAGGTTGCATTGAAATGCATCAATCCTTCTCCTGCTGATAGACCAAGCATGAGTGAAGTTGCATTGGCCATAGTTGCATTGAAAGAGGAGGAAGAAAGATCTTTAACATAG 2007 0.4489 MVQKPLQNKETNPRIMVVMNPILALSIITTILFFSPMAYSESKVVKSALVRFMDNLAPWNNNSEREAPRYWGWNLDTDPCADNWKGVSCSSDGSVKAIVLDDSNLSGTLDATSLCMAKSLQILSLKRNNLQGSVPEAIGNCKYLTRLFLSDNNFSGDLPISLQHLCSLRWLHVARNNFTGPISDKIPASVLISFLGENNKFTGEVPDFDFTKLIQFNVSNNNLKGQIPDVRNKFGVESFFGNPDLCGSPLPAACPPSPSPRKEKRLFITDGVAIYSGYIILGITVVAFFVYKLVRKSMNKVEASKALNKKECPRHRLTRKDPAGGNNGEKSREDSSESKGSGRGGGRGSVEMRSEPSIASLESGITLSTSTLVVLSSRVSKALRFEDLLRAPAELIGRGMHGSLYKVMLDNGVFLAVKRIKDWGISESDFQRRIGKVSQVNHPFVLPPLAYYCSRQEKLLAYEYMDNGSLFNMLYKVGSQNGKPFEWGSRLNIAAKIAETLAYMHEELRESGIAHGNLKSSNILFNNNMEPLISEYGLMVIEHQALRSLSHSKSVRNRVLTAAHAYSTFKVDVYAFGVILLELLTGKVVQNQGVFDFVKWVNSVVREEWSVEVFDKNLVSEGASGERMMNLLQVALKCINPSPADRPSMSEVALAIVALKEEEERSLT* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2026 668 Gene3D Transferase(Phosphotransferase) domain 1 465 667 - -
Amo11g2026 668 SUPERFAMILY Protein kinase-like (PK-like) 394 653 IPR011009 -
Amo11g2026 668 PANTHER OS05G0588300 PROTEIN 27 667 - -
Amo11g2026 668 Gene3D Ribonuclease Inhibitor 45 192 IPR032675 -
Amo11g2026 668 Gene3D Phosphorylase Kinase; domain 1 366 464 - -
Amo11g2026 668 Pfam Protein kinase domain 394 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g2026 668 MobiDBLite consensus disorder prediction 304 353 - -
Amo11g2026 668 Pfam Leucine rich repeat 119 178 IPR001611 GO:0005515
Amo11g2026 668 ProSiteProfiles Protein kinase domain profile. 390 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g2026 668 MobiDBLite consensus disorder prediction 304 340 - -
Amo11g2026 668 Gene3D Ribonuclease Inhibitor 193 257 IPR032675 -
Amo11g2026 668 PANTHER LRR RECEPTOR-LIKE KINASE 27 667 - -
Amo11g2026 668 SUPERFAMILY L domain-like 74 231 - -
Amo11g2026 668 ProSitePatterns Protein kinases ATP-binding region signature. 396 418 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2026 Amo-Chr11 110205761 110208843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g2026 69 652 Receptor kinase-like Gene Family AT1G48480 34.309 1.15e-89 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo11g2026 Pkinase 1.7e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2026 - - adu:107492411 1247.26