LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo11g2005	ATGATTAATATCTTATGCTTTGATAATATCAATTTAGAAGAATCCTATGAGGCTCTTAGAGTCTTTGAGATTCTTGCGGTTAGGGAGAAGCCTGATGTGAGTGTTTACCCACGAGAAGTGCAACCTGAGAATCCCAACAGTTATAGAGCAAGGAAGAGGGAGTATTTCAGGATGAGGCACGAACGCAGAAAGGCTAGAGAAGCAGGACCAGTAGAAACCAGAAGATTGTGTGTGTATGAATTTTTAGAGCTGATGAAGGTGCCACGAGTAGAGTCAAAGTTAAGAGTATTTTCTTTCAAGATTCAATTTCTGTCTCAGGTTACAGAATTTAAGAAGAGTTTAAACGCTGTGAACTCTGCTTGTGAAGAGGTCCGAAAGTCTGTCAAGCTGAAGGAGATCATGAAGAAAATTCTTTTTTTGGGTAATACATTAAATCAGAGAATAGCTAGGGGTATGATCCATAATTGGATTATCACTCGTGCTTCTAACAATAAGATGACATTAATGCACTATTTTTGCAAGGTTCTAGCTGATAGGTCGCCTGGACTGCTTGACTTCCACTTAGACCTTGTAAGCCTGGAAGCTGCGACTAAGCTCTTCCTTCTCATCACTGATATTAGATTCGTGCAGCATGTGTCAGGTGCTAAATCTATTCCTGGAAGGCAAAGAAAAGATGGTACCGATGCAAAGAATGATACAAGGAGTGATGCCCAAGCAGCTCAAAAAAGCGAGGGAGAGAAATCTAACCCAGTCACAAAGAAGGATGGAGAGAATAGCACTCCTGTAAAAGCAGCTGAACCTCCTCCGGACAATGAGTTCGAGAAGCGAATAAGACCAGAGGTGATACCTGCAAGTGATGAAGTAGCGCTGAAAAGCGTAGCCTATTCTGGTAAAAATAGAAGCTGA	906	0.415	MINILCFDNINLEESYEALRVFEILAVREKPDVSVYPREVQPENPNSYRARKREYFRMRHERRKAREAGPVETRRLCVYEFLELMKVPRVESKLRVFSFKIQFLSQVTEFKKSLNAVNSACEEVRKSVKLKEIMKKILFLGNTLNQRIARGMIHNWIITRASNNKMTLMHYFCKVLADRSPGLLDFHLDLVSLEAATKLFLLITDIRFVQHVSGAKSIPGRQRKDGTDAKNDTRSDAQAAQKSEGEKSNPVTKKDGENSTPVKAAEPPPDNEFEKRIRPEVIPASDEVALKSVAYSGKNRS*	302

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo11g2005	301	PANTHER	FORMIN-J	77	200	-	-
	Amo11g2005	301	MobiDBLite	consensus disorder prediction	217	281	-	-
	Amo11g2005	301	MobiDBLite	consensus disorder prediction	221	253	-	-
	Amo11g2005	301	Gene3D	Formin, FH2 domain	56	249	IPR042201	-
	Amo11g2005	301	Pfam	Formin Homology 2 Domain	82	199	IPR015425	-
	Amo11g2005	301	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	69	199	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo11g2005	Amo-Chr11	108283395	108287025	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo11g2005	77	201	FH2 protein (formin) Gene Family	AT5G07740	67.669	4.75e-49	173

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo11g2005	-		-	aip:107643586	206.453

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