Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1994 ATGTGCATTCCAATGTTGGATGGCGTTGTTGAACTCGGCACAACTGATAAGGTAAAAGAAGACATCAACTTAATCAAATATGTAAAGAACTTTTTCATAGGAGATCACCACCGTCCCCAACCAAAGCATGCCCTATCTGAAAACTTTGCCTCCAATCCCATTACAGAAGAAGCTCAATTATTATTGGATTCAGAAACAAAAAGCCTCCCACAAAACAAGCTTAAGGAGCTAGTCGTGGGAGAGGATAGTAGCCGAGTCAGATCGCCGGATTATGGCTCCAATTCACTGAACTCAACCGGGTTGGAGCTGCTTCCACCAGAATTAGCAGTTTCACTAGGTAAATAG 345 0.429 MCIPMLDGVVELGTTDKVKEDINLIKYVKNFFIGDHHRPQPKHALSENFASNPITEEAQLLLDSETKSLPQNKLKELVVGEDSSRVRSPDYGSNSLNSTGLELLPPELAVSLGK* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1994 114 MobiDBLite consensus disorder prediction 80 100 - -
Amo11g1994 114 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 2 32 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1994 Amo-Chr11 106965303 106966311 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1994 1 48 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 60.417 2.18e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1994 - - aprc:113862120 80.4925