Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1969 ATGGTTGGATTTGGATGGGGGAGAGAAGGCATGAAGAAAACGGCGAAAGAGTTGGATGAATTTGTTCAGAACTGCTTAGAAGAACACAGACTTAGCAGAAATCATGGCGCAGAGCCTGATTACATGGACAAGCTTATTTCCAGTATCGATCAAGGCTTCGACGGTCAGGACGTTGATACTCTAATCAAAGCTACATGTCTGACATTAATTTTGGCTGGTACAGACACCACGACAGGGACACTTAGTTGGGCTCTTGCTTTACTTTTGAATAATCGCCAAGTTCTAAATAAAGCTGTTCATGAATTAGACACACATATAGGAGCTAATAGAATGGTGATAGAAACGGATCTAGACAATCTTGTGTATCTTCAAGCCATTGTCAAAGAAACATTCCGCTTGTACCCGCCTGTGGTGCTCAATTTGCCTCACGAATCCATGGATGATTGTGTGGTGGGTGGATACCATATCCCTGCTGGCACACAACTTTGGACTAATATTTCAAAAATGCAACGAGATCCTGCTTTATATCCTGATCCATTAGAGTTTCGACCGGAGAGATTTCTAACAACTCACAAAGACATTGAACTTACGGGTCAGCACTTTGAATTGATTCCATTTGGCGCAGGAAGAAGAATGTGTCCTGGAATGTCATTTGGTCTTCAAATGGTGCAGTTAACACTTGCTAATGTGCTGCATGGGTTTGACATTGTAACAGCCGATGGAAAACCAGTTGATATGGTTGAACGTGTTGGGATAACCAGTGTCAGAGCCAATCCGCTCAAAGTAATTCTTACACCACGTCTCTCTACCCAAGCTTATGTTTAA 825 0.4242 MVGFGWGREGMKKTAKELDEFVQNCLEEHRLSRNHGAEPDYMDKLISSIDQGFDGQDVDTLIKATCLTLILAGTDTTTGTLSWALALLLNNRQVLNKAVHELDTHIGANRMVIETDLDNLVYLQAIVKETFRLYPPVVLNLPHESMDDCVVGGYHIPAGTQLWTNISKMQRDPALYPDPLEFRPERFLTTHKDIELTGQHFELIPFGAGRRMCPGMSFGLQMVQLTLANVLHGFDIVTADGKPVDMVERVGITSVRANPLKVILTPRLSTQAYV* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1969 274 PANTHER CYTOCHROME P450 82C3-RELATED 9 273 - -
Amo11g1969 274 PRINTS P450 superfamily signature 72 89 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g1969 274 PRINTS P450 superfamily signature 204 213 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g1969 274 PRINTS P450 superfamily signature 213 224 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g1969 274 PRINTS P450 superfamily signature 125 136 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g1969 274 Gene3D Cytochrome P450 2 273 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g1969 274 Pfam Cytochrome P450 8 250 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g1969 274 PRINTS E-class P450 group I signature 165 189 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g1969 274 PRINTS E-class P450 group I signature 213 236 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g1969 274 PRINTS E-class P450 group I signature 61 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g1969 274 PRINTS E-class P450 group I signature 81 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g1969 274 PRINTS E-class P450 group I signature 124 142 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g1969 274 PRINTS E-class P450 group I signature 203 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g1969 274 PANTHER CYTOCHROME P450 9 273 - -
Amo11g1969 274 SUPERFAMILY Cytochrome P450 9 267 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g1969 274 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 206 215 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1969 Amo-Chr11 103896563 103898557 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1969 11 274 Cytochrome P450 AT4G31940 47.794 3.55e-88 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1969 - - gmx:100787630 385.185