Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1952 ATGGCTGTTGCACGGAATGCAAACCAACGATTGATGTTGACTGGGACACCACTTCAGAACGATTTACATCRCTTTCAAATGAAGGCAATAATCCCAATTCGTATAGCGGAAACTTATCTCCAATTACGATATCTTCATGAAGAGTGTAGAGTGGGATGCATTATCCACCGTGACATGCGGCCTAACAACATTCTCATAACTCATGATTTTGAACCACTGGAATGGTTTGTAGTTGGTGATTTTGGATTGGCGAGGTGGCAACCTGATGGAGACACGGGTGTGGAAACCCGAGTAATTGGAACATTCGGGTATTTGGCTCCTGAATATGCTCAAAGCGGCCAAATAACTGAGAAAGCTGATGTTTATTCATTTGGGGTGGTATTGGTGGAGCTTGTTACAGGGAGAAAAGCTGTGGATCTCACGCGGCCTAAGGGACAGCAGTGTCTCACTGAGTGGACACGATCTCTGTTGGAAGAATATGCCATTGAGGAACTGATTGATCCAAGGCTGGGGAACCAATACTTAGAAAATGAGGTATATTGCATGTTGCATGCTGCATCATTATGCATACGGCGAGATCCTCATTCCAGACCACGCATGTCACAGGTTCTTCGTATACTGGACGGCGACATGGTCATGGACGCAAGTTACATTTCAACTCCAAGTTATGATGTGGGAAACCGGAGTGGCCGACTCTGGTCGGTGCCGCTGCAGAGGCAGCACCATTACAGGGGTCCTCTGTTAGAGGTGTCACTTGAATCATTCGGTGGGAAGCTATCTCTTGACAAATAG 792 0.4646 MAVARNANQRLMLTGTPLQNDLHXFQMKAIIPIRIAETYLQLRYLHEECRVGCIIHRDMRPNNILITHDFEPLEWFVVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLTRPKGQQCLTEWTRSLLEEYAIEELIDPRLGNQYLENEVYCMLHAASLCIRRDPHSRPRMSQVLRILDGDMVMDASYISTPSYDVGNRSGRLWSVPLQRQHHYRGPLLEVSLESFGGKLSLDK* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1952 263 ProSitePatterns Tyrosine protein kinases specific active-site signature. 54 66 IPR008266 GO:0004672|GO:0006468
Amo11g1952 263 ProSiteProfiles Protein kinase domain profile. 1 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g1952 263 SUPERFAMILY Protein kinase-like (PK-like) 42 218 IPR011009 -
Amo11g1952 263 Pfam Protein kinase domain 36 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g1952 263 PANTHER INACTIVE PROTEIN KINASE SELMODRAFT_444075 42 240 - -
Amo11g1952 263 Gene3D Transferase(Phosphotransferase) domain 1 23 219 - -
Amo11g1952 263 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 42 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1952 Amo-Chr11 102805967 102808176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1952 33 208 Trihelix Transcription Factor Family AT5G38560 49.727 9.82e-52 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Amo11g1952 Pkinase 1.3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1952 - - ahf:112783851 427.557