Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1903 ATGAGAAGTTTTGATGATGATTCCTTTTTTTTGCAGAGAATCAAGAAGAAGATGGCATCATCAAGCTCGTACAATTCACCTTGCGCTGCCTGCAAATTCTTGAGGAGGAAGTGCATGCCAGGGTGTATCTTTGCGCCTTATTTTCCACCCGAAGAGCCTCAAAAGTTTGCAAACGTGCACAAGATCTTCGGGGCAAGCAACGTTACCAAGCTCCTCAACGAGCTTCTGCCTCACCAGAGGGAGGATGCGGTCAACTCCCTCGCTTACGAGGCAGAAGCTCGCGTTAGAGATCCTGTTTACGGCTGCGTTGGCGCCATATCTTTCCTCCAAAGACAAGTGCAAAGACTTCAGAAGGAACTTGATGCCGCCAACGCTGATCTTCTCCGCTATTCCTTTACTGACATCGCTCCGACACCGGCTCTTTCTATGCCCCCCGGACTAACCAATGCTACTTCCCTTCAACAAATTCCCCAAAGGTTTGGGGCAAGATTTGATAACGAAGGAAGTGGATTCTATAACAATAATCGCCAATATTCACCTAATATTTATTCTTACCCATACTCTCTTCCATGGACCGATACCTCTTCCAAGGATATCAGCGATGGGGGCGGGTTAGGTGACGGCGATGGAAGAGGAGGTAATTTGTGA 648 0.4784 MRSFDDDSFFLQRIKKKMASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLLRYSFTDIAPTPALSMPPGLTNATSLQQIPQRFGARFDNEGSGFYNNNRQYSPNIYSYPYSLPWTDTSSKDISDGGGLGDGDGRGGNL* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1903 215 ProSiteProfiles LOB domain profile. 26 127 IPR004883 -
Amo11g1903 215 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 18 203 - -
Amo11g1903 215 Pfam Lateral organ boundaries (LOB) domain 27 124 IPR004883 -
Amo11g1903 215 Coils Coil 106 126 - -
Amo11g1903 215 PANTHER ELONGATED PETIOLULE 1 18 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1903 Amo-Chr11 99600502 99601631 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1903 18 136 AS2 family AT5G63090 90.833 1.02e-75 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Amo11g1903 LOB 4.1e-42 No_clan