Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1879 ATGCAGAGCTCGGCTTTCACTCTCTCCCTCACCCCTTTCCGCAAACCCTTCCTCCACCATCTTTCCCTCGCTTCTTCTTCTTCCATTTCCTCTTTCAGTTCCAAAGCCAACCTCATCAATGTGGATTCTTCATTTTCATGTTCATTCCTACGCCAACCAGCAACACCATCATGGCCTCTTTCTTCTTCATCCTCTTTCAAACTACCCTCCGATCGCTTCGTCCCCAAGGCTGCCGCGGAGAGTGCCAGCGAAAACCGCAGCGCCGGCGGCGACGTTTTGCTCAGAGCTTTGAAGCTAGGAGCCTTGTTTGGTCTTTGGATCATCTTTAACATATACTTCAACATCTACAACAAACAGGTATTGAAGGTGTACCATTTTCCTATAACTGTCACCGCGGTTCAATTTGCTGTTGGGGCTGCCCTTGTGTCCTTTATGTGGTGTTCCAATCTTTACAAGAGGCCAAACCTCAGTAGTGCTCAGCTTGCAGCCATATTGCCACTAGCTGTGGTACATACTTTGGGGAATCTTTTCACTAATATGAGTCTTGGCAAGGTTGCTGTGTCTTTCACACATACAATAAAGGCAATGGAGCCTTTCTTCTCTGTGATCCTTTCTGCTATGTTCCTTCGAGAGATGCCAACTGCATTGGTGATTGGCTCCCTTGTGCCTATTGCTGGTGGGGTGGCACTGGCTTCTGCTACCGAGGCCTCTTTCAATTGGACTGGATTTTGGAGTGCAATGGCTTCTAATTTGTCAAATCAATCTCGTAATGTTCTTAGCAAAAAGCTCATGGTTAAGGAGGAGGAATCAATGGACAACATTACCCTCTTCTCAATAATTACAGTTATGTCCTTCCTATTGACGGCACCTTTGACTCTCATTATGGAGGGTTTCATATTTACCCCTGCTTATCTGCATTCCGCTGGATTAAATGTTAAACAAGTGTACATCAGATCTCTTCTTGCTGCATTCTGTTTCCATGCATATCAACAAGTTGCTTACATGATATTGCAGTGGGTGTCACCTGTTACCCACTCCGTGGCAAATTGTGCTAAGAGAGTTGTGGTTATTGTGAGCTCTGTCTTGTTCTTCCGTACACCTGTCTCACTTGTCAATGCAATTGGAACTGCTATAGCTCTTGCTGGTGTTTTCTTCTACTCCAGGGTGACCAGAACTAAACCAAAGACTACTTAG 1194 0.4548 MQSSAFTLSLTPFRKPFLHHLSLASSSSISSFSSKANLINVDSSFSCSFLRQPATPSWPLSSSSSFKLPSDRFVPKAAAESASENRSAGGDVLLRALKLGALFGLWIIFNIYFNIYNKQVLKVYHFPITVTAVQFAVGAALVSFMWCSNLYKRPNLSSAQLAAILPLAVVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLREMPTALVIGSLVPIAGGVALASATEASFNWTGFWSAMASNLSNQSRNVLSKKLMVKEEESMDNITLFSIITVMSFLLTAPLTLIMEGFIFTPAYLHSAGLNVKQVYIRSLLAAFCFHAYQQVAYMILQWVSPVTHSVANCAKRVVVIVSSVLFFRTPVSLVNAIGTAIALAGVFFYSRVTRTKPKTT* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1879 397 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 97 395 IPR004696 GO:0016021|GO:0022857|GO:0055085
Amo11g1879 397 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 80 375 - -
Amo11g1879 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 295 388 - -
Amo11g1879 397 Pfam Triose-phosphate Transporter family 97 387 IPR004853 -
Amo11g1879 397 PANTHER SOLUTE CARRIER FAMILY 35 80 375 - -
Amo11g1879 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 138 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1879 Amo-Chr11 95509630 95513070 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1879 1 395 Antiporters AT5G33320 62.260 9.36e-162 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1879 K15283 - gmx:100780925 520.005