Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1835 ATGGACACCCTCCAATTTTTCCTCTTCATATTCCAGCTTTTACTCTGCCTCAACCCAATCTCCGCGGTGGACTTCCTCTTCAACTCCTTCACTGGCATCACCAACACCACCAACGTGACCCTCATCGCCGACGCACTCGTAGACTCCTCCGTCGTCCGCATGACCAACGACTCCAACCAATACTCCTTCGGCAGAGCCTTCTACCCTAAAAAAGTCACCATCAAGAAACCCTTCCCTTCTTCTTCTTCTTCAAGCAACTTCTCTTCCTTCTCAGCCTCCTTCGTCTTCTCCATCTTGCCGCAGATCCCGACGAGTCCCGGCTTTGGCCTCGCTTTCGTTCTCTGCAACACAACCTCCCCTCCCGGCGCACTCGCCAGCCAGTACTTCGGTCTCTTCACCAACGCCACCTCACCTCCCCTGTTCCCGCTCCTCGCCGTCGAGTTTGACACAGGCCAGAACCCTGAGTTCGGCGACCCCGACGACAACCACCTCGGCATCGACCTCAACAACATCGTCTCCAAGAAAACTCAGTCCGCAGGGTACTACAACTCCACCGGAGGATTCGTCCCCCTTCGAATGCGAACGGGACAGAACGTTCACGCTTGGATCGATTTCGACGGCGAGACTATGCAGATCAACGTCACCGTCGCTCCGGCGGGCCTTCCCCGCCCGATGAAGCCAACTCTCTCGTACACAGACCCGGAAATGGCGAACTACTTGTCTTCTGATATGTTCGTTGGGTTCTCTGCTTCGAAAACCAATTGGATCGAGGAACAGAGAGTACTCGCATGGAGTTTCAGCACTTTAGGTTCCGCAAGAGACATAAACACAACTAATTTACCAGCTTTCCAGCCTACAACCTCCTCTTCCTCTCTCTCCGGCGGCGCAATCGCCGGAATCGTTCTCGGCTGCGTCGCTTTCGTGGCAATCTTGGTCTCGATCTGTTACCTGTGGTGGCGAAAGAAGATGAAGGAGCAAGAAGAAGAGATCGAGGATTGGGAACTGGAGTACTGGCCCCACAGATTCTCCTACGACGAACTCAGAACCGCAACGGGAGAATTCAGGAGGGAGAATCTTCTAGGCTCCGGCGGGTTTGGAAGAGTATACAGAGGAATGCTTCAGAACAAAACAGAGGTTGCGGTGAAATGCGTCAACCACGACTCAAAGCAAGGCGTGAGGGAATTCATGGCGGAAATTTCAAGCATGGGGAGACTGCAGCACAAGAACTTGGTCCAAATGAGAGGGTGGTGCAGAAAAGGAAACGAGCTTATGCTGGTTTATGACTTCATGCCCAACGGGAGCCTCAACAAGTGGGTGTTTGACAACCCGCCGAAGCTTCTAGAATGGGGGAGGAGGCGAAGGGTGCTCGTCGACGTGGCGGAGGGGCTCAACTACCTTCATCACGGGTGGGACCAGGTTGTTATTCACAGGGATATTAAGTCTAGTAATATCTTGCTAGACTCTGAAATGAGGGGGAGGCTTGGGGACTTTGGTTTGGCGAAGCTATACCAGCAGGGGGAGGTTCCCAACACCACGCGTGTCGTTGGCACATTGGGGTACCTCGCGACAGAGTTGGCTACCGTGGCGGTGCCAACTTCGGCAAGTGATGTTTATAGTTTTGGAGTGGTGCTTTTGGAGGTGGCATGTGGGAGGAGGCCCATTGAGACGTCGGCGGCGGAGGAGGAGGTGGTGCTAATTGACTGGGTGAGGGAGCTGTACGCCCGGGGGAGGATGTGTGACGCTGCGGACCCGAGGATTGAAGGGGAGTATGAGGTTGGGGACATGGAGATGGTGCTCAAGCTTGGGTTGGCTTGTTGCCACCCTGAGCCTCAGAGGAGGCCAACGATGAAGGAGGTGGTTGCAGTGCTTGTGGGGGACAATGTTGCGGAGGAGCCGGGGAAAGTGTTGTCTGATTTGGTGCGTGGCGACGGTGGTGGTCCGGAGAAAGAGGAGGAGACCACGGCTTTACAGGGAAACCTTCCGGATTGA 1989 0.548 MDTLQFFLFIFQLLLCLNPISAVDFLFNSFTGITNTTNVTLIADALVDSSVVRMTNDSNQYSFGRAFYPKKVTIKKPFPSSSSSSNFSSFSASFVFSILPQIPTSPGFGLAFVLCNTTSPPGALASQYFGLFTNATSPPLFPLLAVEFDTGQNPEFGDPDDNHLGIDLNNIVSKKTQSAGYYNSTGGFVPLRMRTGQNVHAWIDFDGETMQINVTVAPAGLPRPMKPTLSYTDPEMANYLSSDMFVGFSASKTNWIEEQRVLAWSFSTLGSARDINTTNLPAFQPTTSSSSLSGGAIAGIVLGCVAFVAILVSICYLWWRKKMKEQEEEIEDWELEYWPHRFSYDELRTATGEFRRENLLGSGGFGRVYRGMLQNKTEVAVKCVNHDSKQGVREFMAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDFMPNGSLNKWVFDNPPKLLEWGRRRRVLVDVAEGLNYLHHGWDQVVIHRDIKSSNILLDSEMRGRLGDFGLAKLYQQGEVPNTTRVVGTLGYLATELATVAVPTSASDVYSFGVVLLEVACGRRPIETSAAEEEVVLIDWVRELYARGRMCDAADPRIEGEYEVGDMEMVLKLGLACCHPEPQRRPTMKEVVAVLVGDNVAEEPGKVLSDLVRGDGGGPEKEEETTALQGNLPD* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1835 662 ProSiteProfiles Protein kinase domain profile. 354 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g1835 662 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 283 IPR013320 -
Amo11g1835 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Amo11g1835 662 Gene3D Transferase(Phosphotransferase) domain 1 430 632 - -
Amo11g1835 662 Coils Coil 316 336 - -
Amo11g1835 662 CDD STKc_IRAK 360 623 - -
Amo11g1835 662 Pfam Legume lectin domain 23 280 IPR001220 GO:0030246
Amo11g1835 662 Gene3D - 21 283 - -
Amo11g1835 662 ProSitePatterns Legume lectins beta-chain signature. 144 150 IPR019825 -
Amo11g1835 662 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524
Amo11g1835 662 CDD lectin_legume_LecRK_Arcelin_ConA 23 268 IPR001220 GO:0030246
Amo11g1835 662 SUPERFAMILY Protein kinase-like (PK-like) 330 623 IPR011009 -
Amo11g1835 662 Gene3D Phosphorylase Kinase; domain 1 339 429 - -
Amo11g1835 662 Pfam Protein kinase domain 355 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g1835 662 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.1 7 654 - -
Amo11g1835 662 PANTHER - 7 654 - -
Amo11g1835 662 SMART serkin_6 354 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g1835 662 MobiDBLite consensus disorder prediction 634 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1835 Amo-Chr11 91363311 91366341 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1835 21 625 Receptor kinase-like Gene Family AT1G15530 66.941 0.0 802
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Amo11g1835 Pkinase 5.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1835 - - lang:109362483 998.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g2459 01 82799035 82801856 Amo11g1835 11 91363311 91366341 hybridization