Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo11g1827 | ATGATGGGTTCAGGTACCAATTTGGTTACCACGGTCATTGGGTTTGGGATGAGTGCCACTTTCATTGTGTTTGTGTGCACAAGAATCATTTGTGGGAGGATAAGAGGGAGTGTTGAATCTCGCATGATGTATGAGATTGAATCCAGGATTGACGTAGAACAGCCAGAACATCATGCTAATGACCCTGAACCCGAGCCTGTTATGCTTGATGCAATCCCCACTTTGAAGTTCAACCAAGAGGCCTTCAGTGCCATTGAAGATACACAGTGTGTCATATGTTTGGCAGATTACAGAGAAAGAGAAGTGTTACGCATCATGCCGAAATGCGGTCACACATTTCATCTTTCTTGCATTGACATATGGCTGAGGAAACAATCCACTTGCCCGGTATGCCGTCTGCCATTGAAAAACTCGTCCGAGGCGAAACATGTTAGACCTGTTACATTTACCATGAGCCAGCCTCTTGATGAGTCGCACACACCAGAAAGGAATCAAGATAGTGAGAGTCGTGTCGAACCGGCCGCTAGCAACTCCTCACAACCACCACCTCCRGGAGAACCAGAAGCAAGGCAATGA | 576 | 0.467 | MMGSGTNLVTTVIGFGMSATFIVFVCTRIICGRIRGSVESRMMYEIESRIDVEQPEHHANDPEPEPVMLDAIPTLKFNQEAFSAIEDTQCVICLADYREREVLRIMPKCGHTFHLSCIDIWLRKQSTCPVCRLPLKNSSEAKHVRPVTFTMSQPLDESHTPERNQDSESRVEPAASNSSQPPPPGEPEARQ* | 192 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo11g1827 | 191 | MobiDBLite | consensus disorder prediction | 177 | 191 | - | - | |
Amo11g1827 | 191 | PANTHER | OS11G0150450 PROTEIN | 1 | 167 | - | - | |
Amo11g1827 | 191 | ProSiteProfiles | Zinc finger RING-type profile. | 90 | 132 | IPR001841 | - | |
Amo11g1827 | 191 | Pfam | Ring finger domain | 89 | 132 | IPR001841 | - | |
Amo11g1827 | 191 | SUPERFAMILY | RING/U-box | 79 | 138 | - | - | |
Amo11g1827 | 191 | SMART | ring_2 | 90 | 131 | IPR001841 | - | |
Amo11g1827 | 191 | MobiDBLite | consensus disorder prediction | 144 | 191 | - | - | |
Amo11g1827 | 191 | PANTHER | OS02G0676500 PROTEIN | 1 | 167 | - | - | |
Amo11g1827 | 191 | MobiDBLite | consensus disorder prediction | 144 | 158 | - | - | |
Amo11g1827 | 191 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 66 | 142 | IPR013083 | - | |
Amo11g1827 | 191 | CDD | RING-H2_EL5_like | 89 | 132 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo11g1827 | Amo-Chr11 | 91148643 | 91150871 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo11g1827 | 79 | 135 | C3H Transcription Factor Family | AT4G10160 | 56.140 | 9.90e-20 | 81.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo11g1827 | - | - | ccaj:109802319 | 340.887 |