Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1821 ATGGATTTGAATTTTAGTGTAGCTGTGATCATGTTCCGTGGCATTGATGTAGATATCAATTTCAATTCGTGCCTTTCCTCCGAGTCTCGTGCTTCTGTGTCCCACGAGGAAAAACGATCTGCTTATGCACCCCAATTCGGAGTGAGGTATGATGAAGTTTATAGAATAGAGAAATGCTGGCGTAAGAAAGGAATACAAAGTTTGCTTGCCTCTTGTGTCGCAAGAAAGAGGAGAAGCGAAGGTGGGCGCACCTTGCGAGCACAGAAGAATGTTATGAAATGCCCTTCATGTTCAATTGACATAGCTGAATTTCTTCAGAACCCAGAGGTTAACAGACACATGATGAGCGCGATAGAAACCCTCCTCCGCGAGGCTGAGATAGAAGAGAGTTCTGAAGTGTCCAATGACAAAAATAATGAAAATATAGAGACTGTGAATGATGATGATGGGACAGAAGTTTCAAAGCATTGTGATTCAGGTGAGAATGTCCTAGAGGAGATCAAGGACAATGATTTGAATCAGCCACACAAGCGCAGAAAGGGTACTGGTGATTCAGCTATTGTGAACAGTGAGGAGCAAATCGATGTGGCAATAGATTAG 600 0.43 MDLNFSVAVIMFRGIDVDINFNSCLSSESRASVSHEEKRSAYAPQFGVRYDEVYRIEKCWRKKGIQSLLASCVARKRRSEGGRTLRAQKNVMKCPSCSIDIAEFLQNPEVNRHMMSAIETLLREAEIEESSEVSNDKNNENIETVNDDDGTEVSKHCDSGENVLEEIKDNDLNQPHKRRKGTGDSAIVNSEEQIDVAID* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1821 199 Gene3D - 22 100 IPR036987 -
Amo11g1821 199 ProSiteProfiles YDG domain profile. 1 80 IPR003105 -
Amo11g1821 199 MobiDBLite consensus disorder prediction 127 199 - -
Amo11g1821 199 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 32 67 IPR045134 -
Amo11g1821 199 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 70 185 - -
Amo11g1821 199 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 32 67 - -
Amo11g1821 199 MobiDBLite consensus disorder prediction 127 185 - -
Amo11g1821 199 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 70 185 IPR045134 -
Amo11g1821 199 SUPERFAMILY PUA domain-like 38 68 IPR015947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1821 Amo-Chr11 90503150 90504760 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1821 12 72 C2H2 Transcription Factor Family AT5G39550 44.262 9.29e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1821 K10638 - aip:107608745 219.55