Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1781 ATGGGGAAGGCATCAAAGTGGTTTCGCGGTCTTTTTGGTCCCAAGAAGCAACACCTACCGCAACCTTCACAAACACATTCTACTCCTTCTTATTCCGTAACTTCTTCTCCCAATCCAACTAAACACAAACGAAGATGGACTTTCGTCAAATCATACAGAGAAAACCACCACCACCACCAACAACAACAACAACACGTGGATGCTTCTGATCCTGACAAGCACGCCATCGCTGTTGCCGCTGCCACAGCCGCAGTCGCTGAGGCTGCCGTCGCTGCAGCTCAGGCGGCTGCCGCCGTCGTCAGACTGACGAGCAGCAGCGGTAGGTCCGCCAACGCTGGAAGCGTGACCGCCGCTAGTAGCCAAGATTGGGCCGCCGTTAAGATTCAATCCGCCTTCCGAGGATGTTTGGCAAGGAGAGCATTACGGGCACTGAAAGGATTAGTTAAGCTTCAAGCACTTGTGAGAGGCCACATCGAAAGAAAGCGAACAGCACAACAGATGAAAAAATGGCAAGCACTTTTAAGAGCACAAGCTAGAGTCTGTGCTCGCAGAGTTCATATCCTTCAAGCCCCAAATTCCACTTCTAAGTCATCTTCCTGCCACCTTCATGGGCCAGCAACACCAGACAAGTTTGAAAGCCCAATCAGATCTAAGAGCATGAAAGATGAGCACTCACCATTGCTTAAGAGAAATGGCTCCAAATCATGCCTCCAGCAGGTCCATGGTAGTAGCGGGCAAGAGAAATGTAGGAACAAATCAGAAAGGCACATAGATGAACTAACATGGAACCAAGAAAAATCATCAATGAGAACCTCTAGCACCACCAATGGTGACAAAAGTGACAAGAACCCTGAAATTGATTCCAGAAGATCACAAGCCACGTCATCATCAAGACGTAGGAACCTCTTTTCCACCACCAACAACCATGTCTTAGTTTCTGATCAGCATTGCATTAGTAGCAAGAGTTACACCACAAGCAACAACAAGAAGGAATCATCATCAGTGATATCTCTTCAATCAGGCCCAAGCCCATCTTGTGAGGTCCAGTCTCAGAGCCCAATGAAGCCCAATTGGGTTGAGGAGAGCCCATTCTGTACAGCTGAAAACAGCCCCCAATACCTATCAGCATCTTCCAAAGATAATGTACCCAAAAGAAGCCCTTTTGGTGGGTCAAGGAGTTATATTTGTGACTATTCTGATTACCCAAGTTACATGGCATGCACTGAATCTTCAAAGGCAAAAGTGAGGTCTCTTAGTGCCCCAAAACAAAGGCCCAACCAATGTGATAGGTCTAGTTCATCTAATAGGTACTCACTCAATGGATTGGGTTGTCAGAGGCCCAATTATGCTTTGCAAGGATGCTTCACCAACAAGGGTTATCCAGGTTCTGGTCGTTTGGACAAGCTTGGAATGCCTGTGGGATATAGATTCTAA 1434 0.4721 MGKASKWFRGLFGPKKQHLPQPSQTHSTPSYSVTSSPNPTKHKRRWTFVKSYRENHHHHQQQQQHVDASDPDKHAIAVAAATAAVAEAAVAAAQAAAAVVRLTSSSGRSANAGSVTAASSQDWAAVKIQSAFRGCLARRALRALKGLVKLQALVRGHIERKRTAQQMKKWQALLRAQARVCARRVHILQAPNSTSKSSSCHLHGPATPDKFESPIRSKSMKDEHSPLLKRNGSKSCLQQVHGSSGQEKCRNKSERHIDELTWNQEKSSMRTSSTTNGDKSDKNPEIDSRRSQATSSSRRRNLFSTTNNHVLVSDQHCISSKSYTTSNNKKESSSVISLQSGPSPSCEVQSQSPMKPNWVEESPFCTAENSPQYLSASSKDNVPKRSPFGGSRSYICDYSDYPSYMACTESSKAKVRSLSAPKQRPNQCDRSSSSNRYSLNGLGCQRPNYALQGCFTNKGYPGSGRLDKLGMPVGYRF* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1781 477 MobiDBLite consensus disorder prediction 192 306 - -
Amo11g1781 477 MobiDBLite consensus disorder prediction 231 246 - -
Amo11g1781 477 MobiDBLite consensus disorder prediction 1 43 - -
Amo11g1781 477 MobiDBLite consensus disorder prediction 264 279 - -
Amo11g1781 477 PANTHER CALMODULIN BINDING PROTEIN IQD22 1 472 - -
Amo11g1781 477 Pfam Protein of unknown function (DUF4005) 371 439 IPR025064 -
Amo11g1781 477 MobiDBLite consensus disorder prediction 247 263 - -
Amo11g1781 477 MobiDBLite consensus disorder prediction 280 294 - -
Amo11g1781 477 ProSiteProfiles IQ motif profile. 145 172 IPR000048 GO:0005515
Amo11g1781 477 MobiDBLite consensus disorder prediction 321 353 - -
Amo11g1781 477 Pfam IQ calmodulin-binding motif 123 142 IPR000048 GO:0005515
Amo11g1781 477 PANTHER IQ-DOMAIN 5-RELATED 1 472 - -
Amo11g1781 477 Gene3D - 119 174 - -
Amo11g1781 477 ProSiteProfiles IQ motif profile. 121 149 IPR000048 GO:0005515
Amo11g1781 477 MobiDBLite consensus disorder prediction 214 229 - -
Amo11g1781 477 MobiDBLite consensus disorder prediction 18 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1781 Amo-Chr11 85238245 85247797 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1781 1 477 IQD Protein Family AT4G23060 41.133 4.79e-74 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1781 - - ahf:112805329 877.47