Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1715 ATGGAGGTGAATGAAAAATGTGATGTGTATAGCTTCGGGATATTAGCTTTGGAAATACTGTTGGGGAAGCATCCTGGAGATGCTGCATCATCATCTATGGTGATGATACCATCTTCAGAGACACTTGATAATAAGTTTCTCTTAAAGGATAAGTTGGATCATCGTCTTCCTTACCCTACAAATCTAATTGCAGTAGAGATTATGCAAATTGTGAAGATAGCAAGTGCCTGTTTGACAGAAAATCCACGTTCTCGTCCTACCATGGAACAAGTGGTGAAAGATCTTGTGGTGGCAAACGCTTCAGTTTCAACAATGGATTAA 321 0.3956 MEVNEKCDVYSFGILALEILLGKHPGDAASSSMVMIPSSETLDNKFLLKDKLDHRLPYPTNLIAVEIMQIVKIASACLTENPRSRPTMEQVVKDLVVANASVSTMD* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1715 106 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 101 - -
Amo11g1715 106 SUPERFAMILY Protein kinase-like (PK-like) 3 96 IPR011009 -
Amo11g1715 106 Gene3D Transferase(Phosphotransferase) domain 1 1 105 - -
Amo11g1715 106 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 101 - -
Amo11g1715 106 ProSiteProfiles Protein kinase domain profile. 1 97 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g1715 106 Pfam Protein tyrosine and serine/threonine kinase 3 95 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1715 Amo-Chr11 77066644 77068174 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1715 1 95 Receptor kinase-like Gene Family AT1G12460 35.644 1.60e-12 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo11g1715 PK_Tyr_Ser-Thr 3.9e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1715 - - gmx:106796400 121.709