Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1713 ATGCAAACCAGCTGTGTTGTTGATGAAAAATTTGTCCCAAAGGTGGGAATGATTTTCAAGACACTAGAAGAAGCTAGAAAGTTCTACAAACATTATTCTAAACTTGCCGGTTTTTCTACGAAAATAAGGAACACGACTCGGGACAGAGAAAAGATTAAGAATCAACTAATTGTATGCTCTAGAGAGGGGAGGTGGAAATCCAAGATATCTCCAACTTTGAACACAAACCCTTCAGCTGGGTTAAATTGTCCAGCTAGAATTTACGTACACATAATGAAGGATGTTGGTCTTTGGACAATTTCCAAAGTTGTTTTGAATCACTCACACCCTTGTTGTCTAGACCAGCCTGAGATGCTCAAACAACACAGGGAGCTTAGCATGTTTGTGCGTCGCACCATCGAAACCTACGAAGAAGCCAGAATCAGACCGAGCAAAACTTACCAATCATTTGTGGCAGCAGCTGGCAGCCACCCATGCACTATTTTCGGTTCACCAGACCTTATGGGTTCGGTTTGGTTTGCAGAGCTATACGAGGATTGGCATATATGGATTCCGGTTTACTTGGATCACCACTTTTGGGCCGGGATGAGAAGCACACAAAGAAGTGAGAGCATGCATTCATTTTTCAACAAGTTCATCACATGGAATATCTCCTTGAGACAATTCTTGAATCAATACGACAATTGTCTAGCAAGCAAAGAGCAAGAAGAGAGAGAATTCCATGCTGCAGATTTTCACACCGTGATACTGTGCGCAAAAAAATTAGCAATAGAGGCACAGTTGCAGCATGTATATACCCATGAGAAGTTCAGGGAAGTTCAAGCTCAATTCAGAGGTAAAGTGAACTGTATCACAAGATCAATACATTCCACCCTAGGTTTCACAACATATGAAGTCATAGAGCAAGTTTCCAACTCTACATTCAACAAGTTTGTCGTCACCTATGACGCAGTATCACGAGATGTAAAGTGCCATTGGTTTCTATTTGAGTCTAGGGGCATATTTTGCCGCCATTCCTTAAGCGTCCTAAGCTTTGAGCGAGTGGATAACGTGGCACCGAAATACATATTGGAATGTTGGAGCAAGAACATAAAGAGGAGGCATACACACATCAACAGCCGCCAAGATGAACCTCTACTGGGGCCAAGAAGTAAGAGATTTGACGAATTGGTGTTTCGGTCGCACAATATATGTGAATTTACATCCGAATCTGAAGAGTTGACCGGAATTTCGCACCGAGCATTTGACAAGTTGAACCTTTTAGACTCCGGATCATCGATTCAGTCAAGCTCCACTGTTTACAATACACCAGATATGAATTATCCAAGAGAGGATTGTACAAGTTTTACTTTTTATTAA 1359 0.4165 MQTSCVVDEKFVPKVGMIFKTLEEARKFYKHYSKLAGFSTKIRNTTRDREKIKNQLIVCSREGRWKSKISPTLNTNPSAGLNCPARIYVHIMKDVGLWTISKVVLNHSHPCCLDQPEMLKQHRELSMFVRRTIETYEEARIRPSKTYQSFVAAAGSHPCTIFGSPDLMGSVWFAELYEDWHIWIPVYLDHHFWAGMRSTQRSESMHSFFNKFITWNISLRQFLNQYDNCLASKEQEEREFHAADFHTVILCAKKLAIEAQLQHVYTHEKFREVQAQFRGKVNCITRSIHSTLGFTTYEVIEQVSNSTFNKFVVTYDAVSRDVKCHWFLFESRGIFCRHSLSVLSFERVDNVAPKYILECWSKNIKRRHTHINSRQDEPLLGPRSKRFDELVFRSHNICEFTSESEELTGISHRAFDKLNLLDSGSSIQSSSTVYNTPDMNYPREDCTSFTFY* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1713 452 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 170 377 IPR031052 GO:0006355
Amo11g1713 452 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 9 112 IPR031052 GO:0006355
Amo11g1713 452 PANTHER OS03G0843700 PROTEIN 170 377 - -
Amo11g1713 452 PANTHER OS03G0843700 PROTEIN 9 112 - -
Amo11g1713 452 Coils Coil 219 239 - -
Amo11g1713 452 Pfam FAR1 DNA-binding domain 27 111 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1713 Amo-Chr11 77048989 77051424 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo11g1713 FAR1 7.1e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1713 - - aip:107636756 499.59