Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1707 ATGTCGAAGCTCGGAGGCGGCAACTGTTTTCGGCGTCTCTTGCTCAGTGTCAATGTCGGTCTTGCCCTTGTTGAAGAAATCGTTGCTTTCGTTGCGTTGTTTCAGGTGGATAGAGAATCTGGACTGGGGTCCAATATTCTTGTAGATAATAAAGGTTGCATTAAACTTGCAGATTTTGGGGCCTCCAAACAAGTTATTGAGCTGGCTATTATTTTGGGTGCCAAGTCTATGAAGGGTACTCCATATTGGATGGCTCCTGAGATTCTGAAATCCTCTTTAGGGTTCATTGAGCTGGACCTCGAGAAAAGATATACTTTAAGGGCAGCAATTGTCACTTGTGGAGGGCTCTGCCCTGGCCTTAATGATGTCATCAGACAGGCTAGTATTGGAATGGATAACTTGAACGCTTAA 411 0.4477 MSKLGGGNCFRRLLLSVNVGLALVEEIVAFVALFQVDRESGLGSNILVDNKGCIKLADFGASKQVIELAIILGAKSMKGTPYWMAPEILKSSLGFIELDLEKRYTLRAAIVTCGGLCPGLNDVIRQASIGMDNLNA* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1707 136 PANTHER ACTIVATED PROTEIN KINASE KINASE KINASE 3, MAPKKK3, MEKK3, PUTATIVE-RELATED 43 89 - -
Amo11g1707 136 Gene3D Transferase(Phosphotransferase) domain 1 43 105 - -
Amo11g1707 136 Pfam Protein kinase domain 44 91 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g1707 136 SUPERFAMILY Protein kinase-like (PK-like) 44 92 IPR011009 -
Amo11g1707 136 SUPERFAMILY Phosphofructokinase 104 127 IPR035966 GO:0003872|GO:0006096
Amo11g1707 136 ProSiteProfiles Protein kinase domain profile. 1 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g1707 136 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 43 89 - -
Amo11g1707 136 Gene3D - 106 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1707 Amo-Chr11 76586895 76590063 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1707 43 89 MAP Kinase Kinase Kinase AT1G09000 85.106 4.13e-23 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Amo11g1707 Pkinase 1.2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1707 K20606 - thj:104805874 91.2781