Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1648 ATGGCGGCAGGGCGAAAAGGTGTTGTTCTGAGAAGAGAATCTTACAGGGAGAGTTCCATCAAGGAGCTTGATCACTGTAGGAATGGTTCTGTACAGAATGGGTTTCATGTTGGAAAAGAGGAGAGAGAGGAAGGTGAGCTCTGTGTCGAGCCTGGGGTGCGTGACTATGAACCTGCCTCAGGGTTTAAAGCAGTTGATGGAGATGAGGTCTTGCCACCACCGGGAAAGAGAAGAAAATTTTCTCCGATTGTGTGGGATCTACCAGAGAAGGAAGGAGTGATCCCCTCCAAAAAAGGGGTCACACAGGTTACTACTGTGTCTCACTCCTGTCCAACTCTGTTGACAAGCCCCGTACAAGATGGTCGTTTGCATGGGGGTGTCTCTAGGATGCCTCCACAAAATTCATCTTGTGTCTTGCAGCCAGGGCATGATGACCAAGAAGCAGATGAAGAGAACAATGCCCAAGGGTGGAACATCAAAATGTCTAGATGGGCTTCTGATGGTCAATCACCGGTGGGTGCTGTTGCTGAATTTAATTTTGGCAAAGTGAAGCCAAGTCCTGAGATTGGTGAATTTCAAAGAGAATGTTCAGAAAGCACAATCACTAGATCCTCAGGAAGCAATGGACGAGATAATAGTGGGGGCCGTTTTGATGGTAGTGATTCTGAAAAGGAATTCCCTACTGACTTCATGGTCGATGATGAGGAACAGAGTGATGTTGGTGATTATGCATGTGATTCTGATGAAGATGCCGGTTTAATGCACCCGCAGAGAAATATAAACATGCTTCAGAGTTGTAGAAGTGTGTGTGAGTTTGAAATGATTAAGAAAATCAACGAAGGAACTTATGGTGTTGTCTATAAGGCTAGGGATAAGAAGACCGGAGAAATAGTAGCATTGAAGAAGGTGAAGATGAATATAGAAAGGGATGGCTTTCCATTGTCATCCTTGAGGGAAATTAACATTCTCTTGTCTTTTGATCACCCCMCCATTGTGGATGTTAAAGAAGTAGTTGTGGATAYTTATGATGGTACTTTCATGGTGATGGAGTACATGGAGCATGACCTTAAGGGACTGATGGAGGCAAAGAAGCAGCCCTTCAGTATGGGTGAAATAAAATCTTTGATGCTGCAACTTCTTGAAGGTGTCAAGTATCTCCATGACAATTGGGTTCTCCATAGGGACTTAAAGACATCAAACATTCTGCTGAGCGACAAGGGGAAGCTGAAAATATGTGACTTTGGGTTGTCCCGGCAGTTTGGAAGCCCACTGAAGCCATATACGCCTATTGTTGTGACACTATGGTACAGGGCTCCAGAGCTTTTGTTAGGAGCTAAGGAATATTCAACCGCAATTGACATGTGGTCAGTGGGTTGCATAATGGCCGAGTTTGTTGCCAGGGAACCTCTGTTCACGGGTAGAACAGAACTTGAACAAATTGATAAGATTTTTAGGACCCTGGGTACACCTGATGAGAAGATTTGGCCGGGCTTATCTAAATTACCTGGTCCTAAAGCAAAATTTGTTAAACAACCGTACAATATGCTAAGGAAGAAATTTCCAGCCACATCTTTTACTGGTTCACCAGTTCTGTCTGAGCTAGGATTCGACTTGTTGAAGAAGCTTCTTACTTACAATCCCGAAGAGAGGATAAGTGCAGAAGAGGCCCTTCTTCATGATTGGTTCCATGAAGTCCCCCTTCCAAAATCTGATTTCAAACCAATTTTCCCTTTGCGTGGCTAG 1743 0.4423 MAAGRKGVVLRRESYRESSIKELDHCRNGSVQNGFHVGKEEREEGELCVEPGVRDYEPASGFKAVDGDEVLPPPGKRRKFSPIVWDLPEKEGVIPSKKGVTQVTTVSHSCPTLLTSPVQDGRLHGGVSRMPPQNSSCVLQPGHDDQEADEENNAQGWNIKMSRWASDGQSPVGAVAEFNFGKVKPSPEIGEFQRECSESTITRSSGSNGRDNSGGRFDGSDSEKEFPTDFMVDDEEQSDVGDYACDSDEDAGLMHPQRNINMLQSCRSVCEFEMIKKINEGTYGVVYKARDKKTGEIVALKKVKMNIERDGFPLSSLREINILLSFDHPXIVDVKEVVVDXYDGTFMVMEYMEHDLKGLMEAKKQPFSMGEIKSLMLQLLEGVKYLHDNWVLHRDLKTSNILLSDKGKLKICDFGLSRQFGSPLKPYTPIVVTLWYRAPELLLGAKEYSTAIDMWSVGCIMAEFVAREPLFTGRTELEQIDKIFRTLGTPDEKIWPGLSKLPGPKAKFVKQPYNMLRKKFPATSFTGSPVLSELGFDLLKKLLTYNPEERISAEEALLHDWFHEVPLPKSDFKPIFPLRG* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1648 580 SMART serkin_6 272 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g1648 580 PANTHER CYCLIN-DEPENDENT KINASE 179 577 - -
Amo11g1648 580 PANTHER CELL DIVISION PROTEIN KINASE 179 577 - -
Amo11g1648 580 Gene3D Phosphorylase Kinase; domain 1 255 353 - -
Amo11g1648 580 MobiDBLite consensus disorder prediction 58 77 - -
Amo11g1648 580 SUPERFAMILY Protein kinase-like (PK-like) 266 568 IPR011009 -
Amo11g1648 580 Gene3D Transferase(Phosphotransferase) domain 1 354 573 - -
Amo11g1648 580 ProSiteProfiles Protein kinase domain profile. 272 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g1648 580 MobiDBLite consensus disorder prediction 186 228 - -
Amo11g1648 580 MobiDBLite consensus disorder prediction 193 215 - -
Amo11g1648 580 CDD STKc_CDC2L1 266 562 IPR045267 GO:0004674|GO:0005524|GO:0006468
Amo11g1648 580 MobiDBLite consensus disorder prediction 116 156 - -
Amo11g1648 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 391 403 IPR008271 GO:0004672|GO:0006468
Amo11g1648 580 Pfam Protein kinase domain 272 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1648 Amo-Chr11 71644066 71647669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1648 267 568 Core Cell Cycle Gene Families AT5G10270 44.969 1.12e-82 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Amo11g1648 Pkinase 1.7e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1648 K08818 - gmx:100788840 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g2100 01 62007210 62010721 Amo11g1648 11 71644066 71647669 hybridization