Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1642 ATGGGAAGCTCACTGGCATCTAGGTTGATGGCTCGCACATCACTCCGAGTAGAGGGCTACATGCAGATTGTTTTTGCAGTTTCTGCTGCTTATCTAATACTTCCCATTTTGACCATTTTCGTCGTGTCTCCTACAAAGGAGAAAGGTGGAGGCATCTCATTTGCTGGTTCCATTCAGCTTTTGGCTTCTGATTTCAATTGCATTGTTATCAACTGGACAAGGACAATACCACTTGTTGTACTTAGAAGCTTGAATGATTTAGTGTATTTCTTGAACATACTTCTTCAGTTTAGGTTGGCTTATGTTTCTGCTAGTACTGGATCAAGGGTGATTGATATAGTTGACCATCCAAAAGAGATTGCTATGCATTATTTGCATAGCTATTTTCTTCTTGATTTATTTGTAGTGATTCCTTTGCCTCAGATAATAATATTGTTTGTGCTACCAAAGTACTTGGGTTCATCAGGAGCAAATCATTCAAAGAATCTTATATCTGCAGTGATCCTTGTGCAATACATTCCCAGATTATTCAGATTCTCCTTACAAAATGGAGCAAGAAACAAAGATGTTGGAACAAGTTTTCGGGATGAAACTCACACAAGAGACCAAGAAACTAAGACTGGCTTGTTTTAA 633 0.3839 MGSSLASRLMARTSLRVEGYMQIVFAVSAAYLILPILTIFVVSPTKEKGGGISFAGSIQLLASDFNCIVINWTRTIPLVVLRSLNDLVYFLNILLQFRLAYVSASTGSRVIDIVDHPKEIAMHYLHSYFLLDLFVVIPLPQIIILFVLPKYLGSSGANHSKNLISAVILVQYIPRLFRFSLQNGARNKDVGTSFRDETHTRDQETKTGLF* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1642 210 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 63 184 - -
Amo11g1642 210 Pfam Sugar-tranasporters, 12 TM 1 61 IPR008509 GO:0015098|GO:0015689|GO:0016021
Amo11g1642 210 SUPERFAMILY Voltage-gated potassium channels 23 185 - -
Amo11g1642 210 MobiDBLite consensus disorder prediction 191 210 - -
Amo11g1642 210 PANTHER CYCLIC NUCLEOTIDE-GATED CATION CHANNEL PROTEIN 63 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1642 Amo-Chr11 70771850 70775703 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1642 67 178 Ion Channels AT3G17700 54.867 3.02e-37 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1642 K05391 - ccaj:109789004 161.77