Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1636 ATGGTCATGGGCCACGCTTTAAAAGCGTGGCCTAGGGTTCCAAAGCGTGCTCAATCTTTAAGGCATTTGTCTCTGCTCTCACCGTTGCATCTCACCCTTGTTGTCTCTGTGCCAACTGTTGCCACGCGCTTAGCATCATCGTTCTCTCTGCTCACCATTGTCGAGAAGGTATCTTTAAGGGCGTTGAGGGCAGTGGTGAGGCTACAGACTATATTTCGCGGAAGGCTAGTGAGGAAGCAAGCTGCTGTTACTCTAAGGTGCATGCAGGCTCTTGTTCGAGTTCAAGCTCGCGTCCGCGCTGGGAATGTGAGGAACTCTCCAGAAGGGAAAGCTGTGCAGACACTATTAGATCAATACCGCAACCAAGTTGATCCTATTAAGGAGGCTGAGACATCAATATGTATCATTGCCAACTTGCTCATTCTGTTATTCGTGGTTAAGGTTGAAGGCGAAAGTTTTTGGTTAAGGTTTTGTGATATGCCAAAGGATTGGATGGATCTACCGAGGTATAGCGAAGAGTATATCAATGGTGTTATTAGTTTTTTAGACTTTGCATACTCTGAGGGAGAACCGGACGGACGACAAATTCAATGTCCTTGTAAGAGGTGTTGTAACATTAATTGGGATATAGAACATGGATTAATCATGGCGAATGGGCAATCCCGATGGCGGTTGACGATGACACGGATGATGAAGAAGGTGCACGCGATGACATCGAAGGACTGCTTAATGATGCATTTGAAGATGTATCTCATGCTGAGGGTGTTACTGTAG 774 0.4612 MVMGHALKAWPRVPKRAQSLRHLSLLSPLHLTLVVSVPTVATRLASSFSLLTIVEKVSLRALRAVVRLQTIFRGRLVRKQAAVTLRCMQALVRVQARVRAGNVRNSPEGKAVQTLLDQYRNQVDPIKEAETSICIIANLLILLFVVKVEGESFWLRFCDMPKDWMDLPRYSEEYINGVISFLDFAYSEGEPDGRQIQCPCKRCCNINWDIEHGLIMANGQSRWRLTMTRMMKKVHAMTSKDCLMMHLKMYLMLRVLL* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1636 257 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 55 122 - -
Amo11g1636 257 PANTHER IQ-DOMAIN 5-RELATED 55 122 - -
Amo11g1636 257 Pfam Transposase-associated domain 162 211 IPR029480 -
Amo11g1636 257 ProSiteProfiles IQ motif profile. 63 90 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1636 Amo-Chr11 70111974 70116986 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1636 25 134 IQD Protein Family AT1G72670 48.182 4.48e-22 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1636 - - aip:110269403 170.244