Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1630 ATGCCTTTTTCCGAGTTCTTCGGCTTCTCACAAGTGACAGGGAATGCTGATATTGAAGTAGCAATGGTGGAAAGCCATGCAAATCTGAAAATAAGGTCAAATAAAAAGCCCAAGCAGCTCTTGAAGATGGTGTCTAATTTGCAAGCCATGCGTCTCACAATCTTGCATCTTAATGTCACCACCACTAACAATGATATTGTCCTCTATTCTCTCAGCGTTAAAGTGAAAAGACTAACAAGAGGAACAACTGATGAAACTATAGGTGACTTGTTATCAGAACTTGGAATCATGGCTCATGTAAGCCACACCAACACTACTAAATTGGTTGGTTATGGTGTGGAAGGTGGAATGCATCTGGTTCTTGAATTGTCTGAAAAAGGAAGCCTAGCTTCAGTTCTTTATGGGTCCAAGGAGAAGCTTCCGTGGTCTATTAGGCAGAGAATTGCATTAGGAACAGCAGAGGGAATATTATATCTTCATGAAGGTTGTCTTTTTGGGTTTGTGGTCAGCGGGTTAGCGCAGAAGCCAACCCAATTGATAAAAGGTTTCAACTTTGACTACACCAAGCAGAGTCCTGTGGCATATGTGCCTCTAATATCGTGTGCTGGTGTTGTTGGTGGCCATGATTCAGTGAAGGAAATTGCAGCTAGTAAGTGGGTGGGTCAAAGGGTGTTACCTCCTAAACAAAATGTGCAGGTTACTGTTTCATTGGAAGTGCCCAAATCAGGTCACAATAGAAATCTTGGGGGGCAGACAGAACAACACTCAAAATCCCAAAAAATTCTTAGCATAACAGAACCTACGTGCAGTTCAATTCTCTTTGGGAAAGGTTTGGTGGGTGGCGGGGAAAGAAATGAGCTTTCTCAACTTAGTTAA 876 0.4235 MPFSEFFGFSQVTGNADIEVAMVESHANLKIRSNKKPKQLLKMVSNLQAMRLTILHLNVTTTNNDIVLYSLSVKVKRLTRGTTDETIGDLLSELGIMAHVSHTNTTKLVGYGVEGGMHLVLELSEKGSLASVLYGSKEKLPWSIRQRIALGTAEGILYLHEGCLFGFVVSGLAQKPTQLIKGFNFDYTKQSPVAYVPLISCAGVVGGHDSVKEIAASKWVGQRVLPPKQNVQVTVSLEVPKSGHNRNLGGQTEQHSKSQKILSITEPTCSSILFGKGLVGGGERNELSQLS* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1630 291 Pfam Putative adipose-regulatory protein (Seipin) 184 249 IPR009617 GO:0019915
Amo11g1630 291 Gene3D Transferase(Phosphotransferase) domain 1 66 186 - -
Amo11g1630 291 PANTHER PROTEIN KINASE FAMILY PROTEIN 73 166 - -
Amo11g1630 291 PANTHER OS08G0249100 PROTEIN 73 166 - -
Amo11g1630 291 Pfam Protein tyrosine and serine/threonine kinase 71 161 IPR001245 GO:0004672|GO:0006468
Amo11g1630 291 SUPERFAMILY Protein kinase-like (PK-like) 72 161 IPR011009 -
Amo11g1630 291 MobiDBLite consensus disorder prediction 241 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1630 Amo-Chr11 69957017 69959230 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1630 2 75 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 58.333 2.66e-23 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Amo11g1630 PK_Tyr_Ser-Thr 7.8e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1630 - - ahf:112771472 166.777