Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1616 GAGCAGCGCTGGCTCAGTGGTGAAGGTAAGCGATCCTTTTGTTTTTGCTTATGCATTCCTCCTTACTTAAGCCCCAATGATGATAACCATACAAGTTGTGCTAATACTCGCTATGATTGTGGGAAGATTAAACTGAAAGTTACCAAAATCCTTTTTTATAATTATTTATCTGATGGTTGTTTTGTTGCAGTGAAAGTGATAAATGAATCAAAAGGGAGCGGAGAAAAATTCATAAATGAAGTTGCTAGTATTAATAGAACATTCCATGTGAACATTGTCTTACTTTTAGAATTTTGTAATGAGAGAAACATAAGAGCACTCATTTATGAGTTCATGTTTAATGACTCATTGGATAAGTTCATTTATGGAAATGGATCTCCAACTCCTACTTGCAATTTGGATTAG 405 0.3432 EQRWLSGEGKRSFCFCLCIPPYLSPNDDNHTSCANTRYDCGKIKLKVTKILFYNYLSDGCFVAVKVINESKGSGEKFINEVASINRTFHVNIVLLLEFCNERNIRALIYEFMFNDSLDKFIYGNGSPTPTCNLD* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1616 134 PANTHER TYROSINE KINASE FAMILY PROTEIN 53 134 - -
Amo11g1616 134 SUPERFAMILY Protein kinase-like (PK-like) 55 126 IPR011009 -
Amo11g1616 134 Gene3D Phosphorylase Kinase; domain 1 48 112 - -
Amo11g1616 134 PANTHER RUST RESISTANCE KINASE LR10-RELATED 53 134 IPR045874 GO:0004672
Amo11g1616 134 Pfam Protein tyrosine and serine/threonine kinase 59 124 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1616 Amo-Chr11 69421214 69422994 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1616 50 126 Receptor kinase-like Gene Family AT1G66980 59.740 2.04e-23 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo11g1616 PK_Tyr_Ser-Thr 3.3e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1616 - - adu:107486800 141.739