Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1613 ATGGTCAAAGCGCCGGTGCTACCCCCTTCTTCCTCGCTGCCACCACCAATCAAGCGAAGGTTAGCCCAGCCACCACTAGAAGCCCCTGTGAAGCTTAGTCAGCCATCACCTCTGCTTGACCGCCCCTTCCTCTGTTCTCAAACTCAGTTGGATCCAGAGCTAGAGTTTGATTGTGAAGTACACCTTCTAGGATTTCTTCCAAATGCTGGTGTAAATTTCCATATTTTGAGCCCTCTCCTCAAGCATAAACAATATTGCACTGTTTGCTGCGTCATCTTCTTCAGGGATGGCCACTGGAGTGAACAAGATGCTGCAATTTTCATACCAGGAGACATAATCAACATTAAATTAGGAGATATCATTCTGGCCGATGCTTGTCTTCTTGAGGGCAATCCTCTAAGTGTTGATCAGTCTGCTTTAACAGGAGAATCTCTTCTAGTGACCAAGAACCCCACTGATGAAGTGTTTTCTAGATCAACAGTCAAGAAGGGTGAGATAGAAGCAGTTGTGATTGCCACTGGTGTGCACACCTTCTTTGGTAAAGTGGCTCACTTGGTTGACAGCGCTAACCAAGTTGGACACTTCTAG 588 0.4643 MVKAPVLPPSSSLPPPIKRRLAQPPLEAPVKLSQPSPLLDRPFLCSQTQLDPELEFDCEVHLLGFLPNAGVNFHILSPLLKHKQYCTVCCVIFFRDGHWSEQDAAIFIPGDIINIKLGDIILADACLLEGNPLSVDQSALTGESLLVTKNPTDEVFSRSTVKKGEIEAVVIATGVHTFFGKVAHLVDSANQVGHF* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1613 195 Gene3D - 174 188 - -
Amo11g1613 195 PANTHER PLASMA MEMBRANE ATPASE 94 195 - -
Amo11g1613 195 SUPERFAMILY Calcium ATPase, transduction domain A 91 186 IPR008250 -
Amo11g1613 195 Gene3D - 94 173 - -
Amo11g1613 195 Pfam E1-E2 ATPase 92 191 - -
Amo11g1613 195 PANTHER CALCIUM-TRANSPORTING ATPASE 94 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1613 Amo-Chr11 68577872 68579668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1613 94 195 Primary Pumps ATPases AT2G18960 80.392 6.74e-50 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1613 K01535 - gmx:100791692 171.785