Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1612 ATGGATGTCCTCTGCAGTGACAAAACTGTAACCTTGGCATTGAATAAGCTCAGTGTTGATAGAAACTTGATTGAGGTATTTGCTAAGGGTGGCCTCTATGACGAAAATCAGGTTGCTATAGGTGCTGCAATTGTTGGGATGCTTGCTGATCCAAAGGAGATAATGTATCCTCAAACATCATCAGTAATGGCATCAAATACAACAAAATGGTTCATGAAAATAAGCCATATAGAACTTAGTACCATTTCCACCCCAACAAAATTGGATGAACGGATCTCAGCAAATCAACCAACTATGTTTTCAAACATAGATACTAATGTAGATACCTATAGTTTTGAAGAAGCAATTTTTTAA 354 0.3672 MDVLCSDKTVTLALNKLSVDRNLIEVFAKGGLYDENQVAIGAAIVGMLADPKEIMYPQTSSVMASNTTKWFMKISHIELSTISTPTKLDERISANQPTMFSNIDTNVDTYSFEEAIF* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1612 117 Gene3D - 17 44 IPR023299 GO:0000166
Amo11g1612 117 PANTHER PLASMA MEMBRANE ATPASE 1 54 - -
Amo11g1612 117 Gene3D - 2 16 IPR023214 -
Amo11g1612 117 PANTHER CALCIUM-TRANSPORTING ATPASE 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1612 Amo-Chr11 68576364 68577791 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1612 1 53 Primary Pumps ATPases AT5G62670 66.154 1.45e-17 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1612 K01535 - ahf:112729985 105.916