Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1590 TGTGTCACCGCCGCTGAATCTGGTCCAGCCGCCGTCCCCGCTCCTATGCTCCAGCGCCTCGCAACTTGTCTTTTCATTGCGTTGCGTCGCCTCTGTTCCACTGCCGTTGTTTGTTCCAGTTCCGTCGCCTTGTCGTCTCATGTGCTCCCTCTCCCTCATCTTGAGAAGTTCCTTCAAGAGAGGATTAAGGTTGGTGGCAAAGCTGGTGCTCTTGGTGATTTTGTCACTGTCTCCCGTGAGAAGAACAAGAGAGGATTAAGGTTGCTTGAAAAGCGTAGCCTATTCTGGTTAGAAAAAGCTAAATCCTTTGGTCCTGGACAGCATCAGTTGAAAAGCGTAGCCTATTCCCAAACGCCAAAGCGTAGCCCTTGGTACAGAAAAGCGTAG 387 0.5116 CVTAAESGPAAVPAPMLQRLATCLFIALRRLCSTAVVCSSSVALSSHVLPLPHLEKFLQERIKVGGKAGALGDFVTVSREKNKRGLRLLEKRSLFWLEKAKSFGPGQHQLKSVAYSQTPKRSPWYRKA* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1590 128 Pfam Ribosomal L22e protein family 44 83 IPR002671 GO:0003735|GO:0005840|GO:0006412
Amo11g1590 128 Gene3D - 33 99 IPR038526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1590 Amo-Chr11 67395766 67399149 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1590 29 83 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 54.545 1.58e-13 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1590 K02891 - qsu:111993050 60.077