Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1582 ATGAACATTGATGACAATAAGAATTTAAAGGAGTCTATCGAATGTGATGAGCTGTGTTTTMGGTATGATAGTAGTTCTGATAAGGAGGAGGAAAATCTTATCAACAATGAGAATGAATTCAGTGAATCCATGGAGGTATCGAATTGTAGCTATAAAATTCAAGAAGTTGAAAAGAAGTTAAACGAATTAAGCTATGATGACATGTGGGGTATTGAGTTTGACACCGTTGATCAATGTTGTGATTTTTATAGAAATTATGCTAAAGTGCACGGTTTTGTTGCGAGACTTGACGAAAAAGGACAAGATTTTAATGGAAACCTTAATATGCGACAGATGGTTTGTAACAGAGAGGGTACACGTAGAAAAAAGTACTTGGAGATGGAGAACAGAAAAAAGGATCACAAGCCAATCACACGTGTAATGTGTCAAGCAAATATTAGATTTCACTATGACTTGATTTTACAAAAGTGGCGGGTCACCAAATTTGAAGAGACTCACAACCATGACCTCATCCCACCTAAGTATATCCAGTTTGTTCCGGCATATCGAACGATGACTGACGCTGATAAAGCACAGGCTGATAGTTTGCACTTTTATGGTTATCGGACAAATGAACTTTTATCCGATTTTAAATCATTGTTTACAACTCCTGTGTTGACCACGTGTCTTCAAGACATTGAGAAGCAAGCGGCCGATATTTTCACCAGAAGCATGTTTAAAGAGGTTCGGTGTGAGATAGAAGAAGCTGTCAAATTAAATGTTGTTACACATTCAGTAAGCAACAATGAAGTTAAGTCGGCATCAAAGAACCGAGATGACTTCATGGAGATTAGAGATGACATTTTTGGACTAATCCAAAAACTTAAAAAGAGACGCGATCCTGACTCCAATGTTCTTTCTAATGCGTGTATGGTCGGTGACCCAACTGTTGTGAAGACAAAGGGAGCCCCTCGTCAAAATAGATGGGCAATAAAATCTCGTAAGTATTCTCATTGTACACGTCGTGGTCATACGATTCGAAGGTGTCCAGAATTACACAGTAGAGACGTCCTACATACTGGTCATCACCAATCGAGTGATGAACTCAATGATGAGAAGATTGATGTCCAAATCGATTCTATTGAGATATCTTCCAAGTATTTTATATAA 1149 0.3786 MNIDDNKNLKESIECDELCFRYDSSSDKEEENLINNENEFSESMEVSNCSYKIQEVEKKLNELSYDDMWGIEFDTVDQCCDFYRNYAKVHGFVARLDEKGQDFNGNLNMRQMVCNREGTRRKKYLEMENRKKDHKPITRVMCQANIRFHYDLILQKWRVTKFEETHNHDLIPPKYIQFVPAYRTMTDADKAQADSLHFYGYRTNELLSDFKSLFTTPVLTTCLQDIEKQAADIFTRSMFKEVRCEIEEAVKLNVVTHSVSNNEVKSASKNRDDFMEIRDDIFGLIQKLKKRRDPDSNVLSNACMVGDPTVVKTKGAPRQNRWAIKSRKYSHCTRRGHTIRRCPELHSRDVLHTGHHQSSDELNDEKIDVQIDSIEISSKYFI* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1582 382 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 17 245 - -
Amo11g1582 382 Pfam FAR1 DNA-binding domain 81 171 IPR004330 -
Amo11g1582 382 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 17 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1582 Amo-Chr11 66994824 66999084 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo11g1582 FAR1 1.9e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1582 - - aip:107607226 398.282