Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1568 ATGAAGAAGCTCACTGCAATTGTTTCCATTTTCGTGATCTTAACTTTCTCTTTTCATGAAATCGCGTATGTTTCTTCATCTCCTCTCTTACACCACGCAAAACAGGTTCACGAAGAGAAATCTTCTACTGTAAGAAATCTTGAACAGGATCAAGAGCATGCTGGTGAAGTGCATTGCTCTAGGGAAAGAAGTAGGGCAGCTCGGAAAGTGATAGAACAGTACTTGACACCGTTTGTTGAGCGAGAAAACTATCATTTTTCAAGAAACTGTAGACTTCACCCTGAAAATGATATATTCAGGGATCAGGAGGAGCATAAAATTTTCGTAGACAGGCATGATTGGCGGTGTGGATATTGTAGAAAAGTTTTCCGTGAAGAAAAATTTCTTGATCAGCATTTTGATAACAGGCACTCCAATCTTCTGAATGTAAGTCATGATAATTGCTTGGCTGATTTATGTGGAGCATTGCATTGTGATGCTGTTATGAATTCCAAGTTCTCTAGAACTAAGTGTTATCCAGCAGCTGCCGCAAAAAACCGTCACCTATGTGAGAGTCTTGCTGACAGTTGCTTTTCCATAAGCCAGGGGCCATCAGCAAGCCGTCTTCATGAATTGTTTATACACCAGTTTTGTGATGCTCACACCTGCTCAGGGAAACAGAAGCCCTTCTCTAGAGGAGGCAAGGAGCAAAGTAGTTTCTTCCGCCTGGCTGCTGGAGCATTGATCTTGGTGCTACTTCCTGTGTTCTATCTTTTTCTTTATCTTGTTCAAAGTGATATGAAGGGTCGAACTCAGGAGCTTCGTCGCATCTCAAAAGCAGGATGGAAAGTCAAACCATCATGA 843 0.4187 MKKLTAIVSIFVILTFSFHEIAYVSSSPLLHHAKQVHEEKSSTVRNLEQDQEHAGEVHCSRERSRAARKVIEQYLTPFVERENYHFSRNCRLHPENDIFRDQEEHKIFVDRHDWRCGYCRKVFREEKFLDQHFDNRHSNLLNVSHDNCLADLCGALHCDAVMNSKFSRTKCYPAAAAKNRHLCESLADSCFSISQGPSASRLHELFIHQFCDAHTCSGKQKPFSRGGKEQSSFFRLAAGALILVLLPVFYLFLYLVQSDMKGRTQELRRISKAGWKVKPS* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1568 280 PANTHER ZINC FINGER PROTEIN-RELATED 7 280 - -
Amo11g1568 280 ProSitePatterns Zinc finger C2H2 type domain signature. 116 137 IPR013087 -
Amo11g1568 280 ProSiteProfiles Zinc finger C2H2 type domain profile. 114 139 IPR013087 -
Amo11g1568 280 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 7 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1568 Amo-Chr11 65968642 65973609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1568 38 280 C2H2 Transcription Factor Family AT5G63280 61.317 2.75e-104 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1568 - - ccaj:109814494 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g1568 11 65968642 65973609 Amo13g0113 13 1651232 1654202 ECH
Amo11g1568 11 65968642 65973609 Amo11g1568 11 65968642 65973609 ECH