Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1565 ATGATGTTATCGATTTCAGATGTTATGTGTGATGCTGGTAAGTCTTGTGGTGTGGAGTCAGTTTGTTTGTATGGTGGAACTTCCAAAGGGCCACAAATCTCATCACTGAAATCTGGCATCTTGTTTGATGTATTTGCACGCCTAATGTTCGATAATATGCCTCAACGAGTTGTTAATGAAATTTTGGTTCAATTCTTGGAAATCAATATTTGCTTTCACATTCTTATTTCCAGAAAAATAGCAGTTGCACTTGGAGTTAGTCTTAGTTGTGCTTCTCTCATGGTTTTACTCTTTGGGATCTTTTGGTATAGACATAAACGACAGCACCAGGCCATCCTGTTTATTGGTGAATATAAGGAAGAGGGAATTGTTAGCTTGGGAAATCTTAAGACTTTCACATTCAGAGAGCTCCAACAGGCAATAGATAGTTTCAGTTCCAAGAACATACTTGGGGCTGGAGGTTTTGGCAATGTTTATAGGGAAAAACTTGGTGACGGCTCTATGGTGGCAGTGAAAAGACTGAAGGATGTTACTGGAAGTTCTGGTGAATCACAATTTCGAACAGAATTGGAGATGATCAGTTTGGCAGTTCATCGCAATTTACTCCGCTTAATTGGATATTGTGCTACTCCTAATGAAAAGCTTCTGGTTTATCCTTATATGTCTAACGGCAGTGTGGGCATCCAGGCTTAG 693 0.3968 MMLSISDVMCDAGKSCGVESVCLYGGTSKGPQISSLKSGILFDVFARLMFDNMPQRVVNEILVQFLEINICFHILISRKIAVALGVSLSCASLMVLLFGIFWYRHKRQHQAILFIGEYKEEGIVSLGNLKTFTFRELQQAIDSFSSKNILGAGGFGNVYREKLGDGSMVAVKRLKDVTGSSGESQFRTELEMISLAVHRNLLRLIGYCATPNEKLLVYPYMSNGSVGIQA* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1565 230 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 76 227 - -
Amo11g1565 230 Gene3D Phosphorylase Kinase; domain 1 114 220 - -
Amo11g1565 230 SUPERFAMILY Protein kinase-like (PK-like) 126 225 IPR011009 -
Amo11g1565 230 ProSiteProfiles Protein kinase domain profile. 144 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g1565 230 Coils Coil 226 230 - -
Amo11g1565 230 Pfam Protein tyrosine and serine/threonine kinase 147 225 IPR001245 GO:0004672|GO:0006468
Amo11g1565 230 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 76 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1565 Amo-Chr11 65613111 65615680 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1565 80 227 Receptor kinase-like Gene Family AT2G23950 69.595 2.97e-66 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Amo11g1565 PK_Tyr_Ser-Thr 7.2e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1565 - - aip:110270670 252.292