Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1546 AAGGCCGCTCCATTATCATGTTCATCTCCCCTTTCCTTTCTAGCTCCTATTCTAGGCCAAAACAGAGTACCAGTGTTGTATCAATCGGCTCTTGAAATACAATACCTACCACAATTAACCTCCTTCGAAACATTACCAATAAAGGGAAAAAGAGAAAAGTTCTATATGGTTGCCGACACCATAGCCATCAACTACCACAGCGACCGGATCTTACCCGAACCGGATGTCTTCATTCGCACCTCCGCCGGAACACGTATTCCTGCCCACTCCAGTATTCTGGCTTCTGTGTCGCCGGTTTTGGAGAACGTCATAGACCGCCCGCGAAAACATCGGAGCTCCGAAAGAATCATCCAGATTCACGGCGTTCCCTGTGAAGCCGTAGCCGTCTTCGTCACCTTCATCTACACCTCCAGGTGCACGGAGGAGCAGATGGACAAGTACGGGGTTCACCTGTTGGCATTGTCGCACGTGTACAACGTGCCGCAGCTGAAGCAGAGGTGCACGAAGGGGCTGGCACAGCGCGTGACGGTGGAGAACGTGGTGGACCTYCTTCAGCTGGCGCGTCTGTGCGACGCGCCGGATCTAGAYGTGAGGTGCATGAGGCTGCTCATGCGGCACTTCAAGGCGGTGGAGAACACCGAAGGGTGGAAGTTCGTTAACAACAACGATCCCTTGCTTGAACTCGATATCCTTCGCTTCATCGACGAACACGAAACGAGGAAAGAGAAATGCCGGAGGCACAGGGAGGAACAGAGGGTGTACTTTGAGCTAAGCGAAGCCATGGACTGCTTGGAACACATATGCACCGAAGGCTGCACCGACGTTGGGCCATGCCACGTGGACACCAGAAAGGAYAGGAGGAACCCCTGCAGCAGATTCYACACGTGTCACGGCCTCCAGCAARTGATTCGCCATTTTGCCACGTGTCAGAAGAGGATGAAGCTGGGGTGCCTTCGGTGCAAGCGAATGTGGCAGCTCTTCAGGTTACATGCCTACGTTTGCCAGCAAACTGATTCTTGCAAGGTTCCTCTTTGCAGGCAAATTCAATTGAAGATGCAACAAGAGAAGAGAAAAGACGATTCAAGGTGGAAATTACTAGCAAAGAAGGTAGCCTCAGCCAGAGTCATATCATCTTTGTCTCTTCCAAAGAGAAAGCGTGATGAGGAAACTAAAGTCACCATGGACAATAATGGCTTCACAAGTTTTGAGTTACATTGA 1218 0.509 KAAPLSCSSPLSFLAPILGQNRVPVLYQSALEIQYLPQLTSFETLPIKGKREKFYMVADTIAINYHSDRILPEPDVFIRTSAGTRIPAHSSILASVSPVLENVIDRPRKHRSSERIIQIHGVPCEAVAVFVTFIYTSRCTEEQMDKYGVHLLALSHVYNVPQLKQRCTKGLAQRVTVENVVDLLQLARLCDAPDLDVRCMRLLMRHFKAVENTEGWKFVNNNDPLLELDILRFIDEHETRKEKCRRHREEQRVYFELSEAMDCLEHICTEGCTDVGPCHVDTRKDRRNPCSRFXTCHGLQQXIRHFATCQKRMKLGCLRCKRMWQLFRLHAYVCQQTDSCKVPLCRQIQLKMQQEKRKDDSRWKLLAKKVASARVISSLSLPKRKRDEETKVTMDNNGFTSFELH* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1546 405 Gene3D - 173 215 - -
Amo11g1546 405 CDD BACK 176 217 - -
Amo11g1546 405 Pfam BTB/POZ domain 74 173 IPR000210 GO:0005515
Amo11g1546 405 SUPERFAMILY POZ domain 75 173 IPR011333 -
Amo11g1546 405 PANTHER BTB/POZ AND TAZ DOMAIN PROTEIN 56 403 - -
Amo11g1546 405 Gene3D Potassium Channel Kv1.1; Chain A 71 172 IPR011333 -
Amo11g1546 405 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 56 403 IPR044513 -
Amo11g1546 405 ProSiteProfiles BTB domain profile. 74 143 IPR000210 GO:0005515
Amo11g1546 405 SMART BTB_4 74 175 IPR000210 GO:0005515
Amo11g1546 405 SUPERFAMILY TAZ domain 249 349 IPR035898 -
Amo11g1546 405 Gene3D TAZ domain 239 381 IPR035898 -
Amo11g1546 405 SMART TAZ_2 251 346 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1546 Amo-Chr11 64466187 64471961 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Amo11g1546 BTB 4.1e-13 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1546 - - cam:101496955 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g1546 11 64466187 64471961 Amo11g1546 11 64466187 64471961 ECH