Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1472 ATGGATCTTGATATGAATCATCATGAAATTAGGATGACATTAAATGAAGAATTAGAGCCTTATGAAGTCATGGATTTCCCATCAATGGATGATGCAAAGACTTATTATACTAGGTATGCTACGAAAAAAGGATTTAGTTTTCGCATGGGTCGTGTGACTAAATCGAAAATAGATGGCGCAATAATTGGTCAAGAAATTCTTTGTGCAAAAGAAGGAATCCATGGAGTACTTGATGAAACAAGGATAGATTGTCAAGCAATATTATATGTTAAAAGAGGAAAAGATCAATATTTTATTTCTAGATTTATAAAAGACCATAATCACAATCTTGCCACCCTTAAAAGTACCAAAATACAAAAATGTCTTATTGATGTGCTTGATGAATCTGGTTTGATTCCTAACAAAATAGCACCTATCTTAGCTACAGAGAGTGGTGGAGTTGAAAATATTAGTTTTATTCAACAAGATGTTATAAATTACTTGAGTAGAAAGAGACAGAAGAACTTAGAAAAGGGAGATGTCTAG 525 0.3219 MDLDMNHHEIRMTLNEELEPYEVMDFPSMDDAKTYYTRYATKKGFSFRMGRVTKSKIDGAIIGQEILCAKEGIHGVLDETRIDCQAILYVKRGKDQYFISRFIKDHNHNLATLKSTKIQKCLIDVLDESGLIPNKIAPILATESGGVENISFIQQDVINYLSRKRQKNLEKGDV* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1472 174 Pfam FAR1 DNA-binding domain 34 111 IPR004330 -
Amo11g1472 174 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 13 139 - -
Amo11g1472 174 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 13 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1472 Amo-Chr11 57650650 57651238 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo11g1472 FAR1 8e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1472 - - lang:109336948 171.785