Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1438 ATGGATCCAATTACAACATCATCTTCACAAGGGCGTTCTCTTCTCCCTCCTTTCAACACACCAAGAGATCTCCAACTTCATCACTTTTCCAAGAAGGAGACAGACACAGAAACAGGCGAAGAATCTGAAATAACAAGAAGGCCACGCGGTAGACCCGCGGGATCCAAGAACAAGCCAAAACCACCCATCATCATCACGGGCGACAGCGCCAACGCGCTCCGCACGCACGTCATGGAAGTCGCAGACGGCTGCGACATCGTCGAGAGCGTCTCCGCCTTTGCGCGGAGGCGACAAAGGGGCGTGTGCATCATGAGTGGCACCGGCACGGTGGCCAACGTCACTCTCCGCCAACCGGCTTCAAGCAACGCGGTCGTGACGCTCCAAGGGAGGTTCGAGATCTTGTCACTGGCGGGGTCGTTCCTGCCGGCGCCGGCTCCACCGGAAGCGTCACGGTTGACGATATACTTGGCCGGGGGGCAAGGGCAGGTGGTGGGAGGGAGTGTTGTTGGGACGCTGGTGGCTTCGGGGATTGTAGTGATCATGGCTGCTTCTTTTGGTAACGCTGCTTATGAGAAGCTTCCGTTGGAGGAAGATGACAACAATGGTGATGCTGCCACGTTGGCACTGCAACAAGGGGTTTCTTCTTCCATGGATTCCCCTGGGGCTAGTAGTAGTGTTCAGCATCAGCAGCAACATTATTCTTCACAGACACAGCTTTTGAGGGATGTAACTGCAACTCATCAACTTTTCCATCATGCTGGTTTGGTCAACGCTCCGAATATTGTGGGTTCTTCCGTTCATCATCAGATGCCTTCTGATCAAGATTTTTGGGCTTCTGGGCGCCCTCCATTCTGA 855 0.5439 MDPITTSSSQGRSLLPPFNTPRDLQLHHFSKKETDTETGEESEITRRPRGRPAGSKNKPKPPIIITGDSANALRTHVMEVADGCDIVESVSAFARRRQRGVCIMSGTGTVANVTLRQPASSNAVVTLQGRFEILSLAGSFLPAPAPPEASRLTIYLAGGQGQVVGGSVVGTLVASGIVVIMAASFGNAAYEKLPLEEDDNNGDAATLALQQGVSSSMDSPGASSSVQHQQQHYSSQTQLLRDVTATHQLFHHAGLVNAPNIVGSSVHHQMPSDQDFWASGRPPF* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1438 284 CDD DUF296 74 147 IPR005175 -
Amo11g1438 284 MobiDBLite consensus disorder prediction 212 236 - -
Amo11g1438 284 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 33 284 - -
Amo11g1438 284 MobiDBLite consensus disorder prediction 25 50 - -
Amo11g1438 284 MobiDBLite consensus disorder prediction 1 16 - -
Amo11g1438 284 MobiDBLite consensus disorder prediction 1 64 - -
Amo11g1438 284 SUPERFAMILY AF0104/ALDC/Ptd012-like 70 199 - -
Amo11g1438 284 Pfam Plants and Prokaryotes Conserved (PCC) domain 74 186 IPR005175 -
Amo11g1438 284 Gene3D - 73 201 - -
Amo11g1438 284 ProSiteProfiles PPC domain profile profile. 70 210 IPR005175 -
Amo11g1438 284 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 33 284 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1438 Amo-Chr11 53187846 53188700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1438 41 284 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 58.300 1.20e-71 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1438 - - gmx:100802044 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g1438 11 53187846 53188700 Amo11g1438 11 53187846 53188700 ECH