Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1423 ATGAAGAGTTCAGATAAACCTCCGATGGGGTCGAATTCAAGAACCCTAGCTGCTGAATCACCTGTTGTGAACAATCGGAGTGATGGTACGGTCCAGCAAAGTAGAAAGAAAGGGCCAGCTACCTCGCATCTCGATGGATTGAATTGGGAGGTGTTTGTTGTCAATGAGTCGGATGTCAATGCCTTTTGGCTACCTGGTGGTGAGATTGTTGTATACACCGGATTATTAGAGCATTTTAAAAGTGATGCTGAGATTGCCACTATAATTAGACGTGAGGTTGGTCATGCTTTGGCCCGACACACCGCTGAATATATGACAAAGAACTTATGGTTTGCTATCCTGCAGAAGATGGCGGGCAAGCAAAGTGTTTCCTCTGACCCCCTGAGCTGGGGCCTAGCAGCGGATTCACTCCAGGGCAGCCACTTTCATGAGGTCAAACGCATGGTGGCGGAGTACCGAAAAACTATTTACCAGAGATACATTGATCCACAGATGTTGTTAATTATTCAACTCAATTTTTCAAAGAAACAACCTGTGCTGCTTTGCTCCTATGTTCTTTCCGTACTTCTTTCGCGCTGGTTTATGATTGGTCAGTCTTCTCTGCTCCAAAGGTCACTGATTCTACTGGTGACTCCTGAAGATGTTCAAAAACTTAATCTCCCTCCAGAATCAGTGAACAAAACTCCATCTGGGGAAACATTTGTTAAATCAAATTTGCAGAAGGCTAGTATTGGAATGGATAACTTGAACACTTAA 756 0.4405 MKSSDKPPMGSNSRTLAAESPVVNNRSDGTVQQSRKKGPATSHLDGLNWEVFVVNESDVNAFWLPGGEIVVYTGLLEHFKSDAEIATIIRREVGHALARHTAEYMTKNLWFAILQKMAGKQSVSSDPLSWGLAADSLQGSHFHEVKRMVAEYRKTIYQRYIDPQMLLIIQLNFSKKQPVLLCSYVLSVLLSRWFMIGQSSLLQRSLILLVTPEDVQKLNLPPESVNKTPSGETFVKSNLQKASIGMDNLNT* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1423 251 PANTHER METALLOENDOPEPTIDASE OMA1 32 176 - -
Amo11g1423 251 PANTHER METALLOENDOPEPTIDASE OMA1, MITOCHONDRIAL 32 176 - -
Amo11g1423 251 MobiDBLite consensus disorder prediction 1 41 - -
Amo11g1423 251 MobiDBLite consensus disorder prediction 1 39 - -
Amo11g1423 251 Gene3D Metalloproteases ("zincins"), catalytic domain 34 106 - -
Amo11g1423 251 Pfam Peptidase family M48 42 113 IPR001915 GO:0004222|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1423 Amo-Chr11 51966253 51969925 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1423 209 242 Core DNA Replication Machinery Family AT5G63960 82.353 2.56e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1423 K23010 - adu:107495268 159.073