Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1398 CGGGAACCTTCCCTCGCTGCTGACATCTCTGTTCGCTCTGTTCGTGCTTTAGAATATATTGCTGGTAATGTATACTTCTTCAAAAAGTGCATAATACATATAATCCAAATGAGAGGGAGGAAACTGAGGAGAACCAGCTGCCTGGCCCAAATTCTTGAGGACATGCTGTTGCTAGTTCTTGCTGAATCAATTATTGTGGCTGAACAATTTGGATCAGAGTTGACAACTCCTGAAATTGATCACACATATTGGTGGATTGTTGGTGCTAATTGCGGTTGTGCCCCTGCTATTTGCATTCGTGTTGCTGCTGCTGTTATTGGCTATCTAATAAAGTTATATTTTTTTTATCATTTTGCAAAAACTCAATGCACCTCAGCCCCATTCCTCTCTGAAATTGAAAGAAAAAAGCAAATCAAGCTCTACACACCCATTGACCCAGCCCCGCCGCCCGCAGCCACTCTAACTATCGCAGCCACCTCAATTTTGGTGTATGTTCATTTTTGGGAGATGGAGCCGTCGGATAGAGACGATCTAGATTTTTTAGACGACGATTCAGAGGCTGATAAAGATAGACCTCAAGATAAGAGAATAGCAGAGCTGCCACGAGAAGATATCATGCAACTTCAGTTTACAGATGAGGAAGTTGTTTATCGATTCTACAAGACTTATGCAATGATGCACGGTTTCGCTGTGAGGTTGGATGAAGTCAGACGCGATAGCGATGGTTCCGTAATTATGCGCCAAATTGTTTGCAATCAGGCAGGCTCAAGAAAGGAAGAGGTTGAAAAGGACGAAAGAATCAAGGACCACCGACCCCTAACTCGAAGTTGTTGCCGGGCAAGAATTCGTGCAAGACTAGATACAAAAATTCAGAAATGGAAGGTCGTTTCGTTCTACGAAGAGCACTCTCATGAATTAGTTGCTCCACTCGACGTTAGCATGATGCCTGAGTATTGCACATTCAGTGTCTTGGATAAATCTCAGGCAAAGAATTTGCACTACATAGGCATCAGGACC 1017 0.4336 REPSLAADISVRSVRALEYIAGNVYFFKKCIIHIIQMRGRKLRRTSCLAQILEDMLLLVLAESIIVAEQFGSELTTPEIDHTYWWIVGANCGCAPAICIRVAAAVIGYLIKLYFFYHFAKTQCTSAPFLSEIERKKQIKLYTPIDPAPPPAATLTIAATSILVYVHFWEMEPSDRDDLDFLDDDSEADKDRPQDKRIAELPREDIMQLQFTDEEVVYRFYKTYAMMHGFAVRLDEVRRDSDGSVIMRQIVCNQAGSRKEEVEKDERIKDHRPLTRSCCRARIRARLDTKIQKWKVVSFYEEHSHELVAPLDVSMMPEYCTFSVLDKSQAKNLHYIGIRT 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1398 339 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 184 310 - -
Amo11g1398 339 Pfam FAR1 DNA-binding domain 218 307 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1398 Amo-Chr11 50508945 50515462 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo11g1398 FAR1 9.4e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1398 - - aip:107620373 299.671