Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1386 AAAATATCTGCTTTTATTGGTGGTCTGGATCTTTGTGATGGCAGATATGACACACATCAGCATAGGCTATTTCACGATTTAGAAACCGTTTACAAAGAGGATTTTCATAATCCTACATTTCAAGTAGGTTCTAGTGGAGGTAGACCAAGAGAGCCATGGCATGGCATGATTTGCAAGGTGACCGACGAAAATGATCCTGAAACTTGGAATGTGCAGGTATTTCGGTCCATAGATTCAGGATCAATGAAGGGTTTTCCAAAGGATTTCGACAAGACTCAATCTCAGAATCTTTTATGTGGAAAGAATTTAAAAGTAGACCAAAGCATTCATACTGCTTATGTTAAATCAATAAGATCAGCTCAACACTTTATTTATATTGAGAATCAATTAATTCTAATGGTTATCTCATTCATTCTGGGACTTATACCAAACACAACAACTGTCAATACTTTTCTTAAGGGAGAGGAAAAGAATCAAATGCTTCGATCACAATTACAACTCTTTAGGAAAGGTAGACAAGTCTCCTTTGGTGCTTTGCAAGTTGTTGAGAATGTTAAAATTTTCTTACTTTTTTACATCTTACTATTTTGA 591 0.3519 KISAFIGGLDLCDGRYDTHQHRLFHDLETVYKEDFHNPTFQVGSSGGRPREPWHGMICKVTDENDPETWNVQVFRSIDSGSMKGFPKDFDKTQSQNLLCGKNLKVDQSIHTAYVKSIRSAQHFIYIENQLILMVISFILGLIPNTTTVNTFLKGEEKNQMLRSQLQLFRKGRQVSFGALQVVENVKIFLLFYILLF* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1386 196 PANTHER PHOSPHOLIPASE D 1 60 - -
Amo11g1386 196 PANTHER PHOSPHOLIPASE D 1 60 IPR015679 -
Amo11g1386 196 PANTHER PHOSPHOLIPASE D 60 132 IPR015679 -
Amo11g1386 196 PANTHER PHOSPHOLIPASE D 60 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1386 Amo-Chr11 49690800 49692481 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1386 1 132 Phospholipase D Gene Family (Wang group) AT2G42010 47.027 8.60e-49 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1386 K01115 - tcc:18607832 173.326