Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1356 GATGTGCAACAATTCTTGAATGTCCAAAATATGGATGTAGAATTTGATTGGCTACCTAAATTGGGCAAAACTTTTAACGCTGTCGAAGAAGCATGGCAATTTTGGATTGATTATGGTGGGAGGATGGGATTTGGTGTCCGCAAGCAATATTCTAACAAAAATGCAGATGGAAAAATTCTAAGTCTTAGATTCGTCTGTGCCAAAGAAGGTGTTCGTAAATCAGACAAAAGAGATTCTTTGACGATTCATGATTTTTTCAGTGAGCATAATCATCCTTTGCATCTTCCACATACAACTCACATGTTAGCATGTCAACGGAAAATATCTCAGGTTCAAGCTCAAGAAATTAAAATGGCAGATGACTCAGGAATCACACAACGGGCTTCATTTGAATTGATGAGTAGACAAGTTGGTGGAAGAGAAAATATTGGTTATACACGTTTAGACCAAAAAAATTATCTTCGTACCAAAAGAATGAAAAGCATGGCATACGGGGAGGCAGGCAGCTTAAAGTTTGAGACTTTTGGCATTTTGTGTTGTCATGCAATCAAAGTTTTAGATGTTAAAGATATTAAATTACTGCCTGACCAGTATATTTTGAAGAGGTGGACAAGAGGAGCAATGAGGGGATTAGTAAATGATATGCATGGAAGAATAGTTGAAGAAGATACTTGTCTTACTAGCACACAATGGTTTAAGCAAACCTGTCCTAAGTTAGTAAGAATAGTCACACAAGCCTCTGATTGTAAAGAAGCACGTGTCTTTGTGGAAAAAGCTGTGGAGGAGTTAAGTAAAAAGGTTGATGATATCTGCAAACTAAATTTGGGATTAGAAATCAACGATACTGATTCTTCCCTCCCAATTCAATGTACAAACTTTCAACCCTTGGAAGTCAGAGGTTTGAAAAGAAGAAATGGCGTGAGAAATTTTAGAAGGCGTCCAAAAAGTTGGGTTGAAAAACAACCCAAAAATAAGAAGAATCAAATTAGCAACACTTCACAACAACAAAAACAAGACAAGGTAGAATCTTGGATGCATACTAACAGAGCTTAA 1053 0.3675 DVQQFLNVQNMDVEFDWLPKLGKTFNAVEEAWQFWIDYGGRMGFGVRKQYSNKNADGKILSLRFVCAKEGVRKSDKRDSLTIHDFFSEHNHPLHLPHTTHMLACQRKISQVQAQEIKMADDSGITQRASFELMSRQVGGRENIGYTRLDQKNYLRTKRMKSMAYGEAGSLKFETFGILCCHAIKVLDVKDIKLLPDQYILKRWTRGAMRGLVNDMHGRIVEEDTCLTSTQWFKQTCPKLVRIVTQASDCKEARVFVEKAVEELSKKVDDICKLNLGLEINDTDSSLPIQCTNFQPLEVRGLKRRNGVRNFRRRPKSWVEKQPKNKKNQISNTSQQQKQDKVESWMHTNRA* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1356 350 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 170 278 IPR031052 GO:0006355
Amo11g1356 350 MobiDBLite consensus disorder prediction 309 350 - -
Amo11g1356 350 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 15 77 IPR031052 GO:0006355
Amo11g1356 350 Pfam FAR1 DNA-binding domain 33 78 IPR004330 -
Amo11g1356 350 PANTHER OS02G0542200 PROTEIN 170 278 - -
Amo11g1356 350 PANTHER OS02G0542200 PROTEIN 15 77 - -
Amo11g1356 350 MobiDBLite consensus disorder prediction 323 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1356 Amo-Chr11 47242877 47244989 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo11g1356 FAR1 8.8e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1356 - - ahf:112709060 330.872