Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1330 ATGCCAACTGTCCTTTCAGTTACAATGGCTATTGGTTCACACAAATTGTCTCAGCAGGATGCTATAACAAAGAGAATGACTGCAATTGAAGAAATGGCCGGAATGGATGTCCTATGCAGTGATAAAACAAGCACATTAACTCTCAACAAGCTTACAGTGGACAAGAATCTAATTGAGGTTTGA 183 0.3934 MPTVLSVTMAIGSHKLSQQDAITKRMTAIEEMAGMDVLCSDKTSTLTLNKLTVDKNLIEV* 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1330 60 Gene3D - 36 50 IPR023214 -
Amo11g1330 60 PANTHER ATPASE 10, PLASMA MEMBRANE-TYPE 1 60 - -
Amo11g1330 60 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 34 IPR023298 -
Amo11g1330 60 Gene3D - 1 35 - -
Amo11g1330 60 PANTHER CALCIUM-TRANSPORTING ATPASE 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1330 Amo-Chr11 46106294 46106784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1330 1 60 Primary Pumps ATPases AT2G07560 95.000 3.62e-33 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1330 K01535 - ahf:112742714 112.464