Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1321 ATGCTTTTATCATGCTTTTACATCGAGGACCATAACTCCATAATTGAGGTAAGTATCAAAGTAGTTCTTGAAGTTATCCTCGAGCCTCAAAATAATCCTGAACTTAAAAATTTGTCGAGATCGTCTCTGAAGTTGATCTCCGGTACTCATAGTGGTCCTTCTGGTGAATTCTGTCCAGCTGGCGCAACCAAAAAGCTGACCTGGCGTCAATTATCAGTACTAAGTTGCAGCAACAACGACGCAGAGGGTCCTTCTTCAGATTTCCTATACACCTGCAATGGATTCCAAAAATCTTGCTTAGCCTTTCTCATATTCAAATCCCAAACTCCTCACAACACCATTGCCACAATCTCCAACCTCACTTCCTCAAACCCAGAGGACCTTGCAAGGTTCAACAACGCCACTCATTCCACACTGTTCCGAACCGGCAAAGAAGTCATTGTCCCTCTCAATTGTTCTTGTCCAACCAGAGAACATGATGATGAGTACTATCAAGCCCAAACCACATACGTTCTGCCAAAAGATCCAACATATTTTACAACAGCAAATGATACCTTTCAGGGATTAACCACGTGCGATTCTCTCCAGCGTTACAATCCTTATGGGGTTCTTGATTTGCATCCTGGCATGGTGTTGCACGTGCCCCTCAGATGCGCTTGTCCGACGGCGCGTCAAGCCGGTAGCGGCACCAAGTATTTCCTGACCTACTCGGTTAATTGGGGTGATAACGTCTCTAATATCGCAACACGGTTCCATGTCAACGCAAGTAGTATGGTTGATGCCAATGGTTTATCCTCAGAAAATGAAATGCTCTATCCATTCACAACTTTCAAAATGGTCAACCACCTTCTCCAACTACTCTTTACACTAAGAAAGGATAAGACAAAGACAAAAAGAAAAAGAATCATAGTTGCTCTTACTTCCTCTGCGAGCTTCTTGTTTTTTCTGTTTGTCGTTTTATCTCTTGTGTTTGTGCGTAGAAAGAGATTAGAAATTTTCTTCAGGGGAGATAGAAGAGGCAGAACAAAGCAAGTGTTTTCAGAACAAATACGTGAAGGGTTAGCAAGCATTGAGCTTCTTTCCAAAGTGTACAGGTTTGATGAAATTAAAGAAGCAACTGAGAATTTCAGTGCAAGCAACAGAATCAAAGGCTCTGTCTACCGTGGGGTATTTGGTAAGGAGAGGAAAATCATGGCGATCAAGGAGATGAATTTGGGTGCCTCTAAGGAAGTGAATTTGTTAGGAAGGATCAATCACTTCAACCTGATAAAGCTGGAAGGTTACTGTGAAAAAGATGGATCCTTCCATCTTGTTTTTGAGTACATGGAAAATGAACACCAATGTTGGAGAAAGAGGATTCGGATTGCTGTGGATATTGCAAATGGACTTGAGTATCTTCATAACTTCACAGATCCTTGCTATGTTCACAAGGCCATAAACACTGACAATATATTGTTAAATAAAGATCTAAGGGCCAAGATAGCGAATTTCACTTTGGCTAAAGAATCAGATAGAGAAGTAACAAGCTCTTGTTCTTATTACACATCACATGTTGTGGGAACTAGGGGTTATATGGCTCCAGAGTATCTTGATTCAGGGAGAGTCACATCGAAGATGGACGTGTATGCGTTCGGAGTGGTGCTGTTGGAATTGATCACTGGCAAAGATTCTATTATTGTGCAGGATGATGGAAGTGAGACGATGCTTTCATCAATCATATTGAATCTCATTGACAAAGATGATGCAGAAGAGAAACTCGGTTTGTTCATTGATCCTAGTCTCGTGGGAAACAGTCAGAAGGTCTATGCAATTCAGCTAGTTAAGCTAAGCCTAGCATGCTTGGTTGAAGAACCTTCAAGGAGACCAAACATGGCAGAAGTGGTCTCGAGTTTGCTTAGAATATATACAGAAATTGAGACAAGAACGTCACCCTGCCGCATCAATGACAGTGGAAGCACGGAGAGGTTAAATCGTATAGAGTGTGACGGAGAAATGAAGAGTGAAGAGTGTGACAGAGAGTAG 2022 0.4194 MLLSCFYIEDHNSIIEVSIKVVLEVILEPQNNPELKNLSRSSLKLISGTHSGPSGEFCPAGATKKLTWRQLSVLSCSNNDAEGPSSDFLYTCNGFQKSCLAFLIFKSQTPHNTIATISNLTSSNPEDLARFNNATHSTLFRTGKEVIVPLNCSCPTREHDDEYYQAQTTYVLPKDPTYFTTANDTFQGLTTCDSLQRYNPYGVLDLHPGMVLHVPLRCACPTARQAGSGTKYFLTYSVNWGDNVSNIATRFHVNASSMVDANGLSSENEMLYPFTTFKMVNHLLQLLFTLRKDKTKTKRKRIIVALTSSASFLFFLFVVLSLVFVRRKRLEIFFRGDRRGRTKQVFSEQIREGLASIELLSKVYRFDEIKEATENFSASNRIKGSVYRGVFGKERKIMAIKEMNLGASKEVNLLGRINHFNLIKLEGYCEKDGSFHLVFEYMENEHQCWRKRIRIAVDIANGLEYLHNFTDPCYVHKAINTDNILLNKDLRAKIANFTLAKESDREVTSSCSYYTSHVVGTRGYMAPEYLDSGRVTSKMDVYAFGVVLLELITGKDSIIVQDDGSETMLSSIILNLIDKDDAEEKLGLFIDPSLVGNSQKVYAIQLVKLSLACLVEEPSRRPNMAEVVSSLLRIYTEIETRTSPCRINDSGSTERLNRIECDGEMKSEECDRE* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1321 673 CDD LysM 235 273 IPR018392 -
Amo11g1321 673 ProSiteProfiles Protein kinase domain profile. 376 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g1321 673 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 72 642 - -
Amo11g1321 673 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 72 642 - -
Amo11g1321 673 Pfam Protein kinase domain 384 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g1321 673 Pfam LysM domain 236 276 IPR018392 -
Amo11g1321 673 Gene3D LysM domain 233 278 IPR036779 -
Amo11g1321 673 ProSiteProfiles LysM domain profile. 234 279 IPR018392 -
Amo11g1321 673 Gene3D Phosphorylase Kinase; domain 1 351 437 - -
Amo11g1321 673 Gene3D Transferase(Phosphotransferase) domain 1 438 651 - -
Amo11g1321 673 SUPERFAMILY Protein kinase-like (PK-like) 360 634 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1321 Amo-Chr11 45892159 45894523 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1321 62 634 Receptor kinase-like Gene Family AT2G23770 35.122 9.07e-104 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Amo11g1321 Pkinase 3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1321 - - gmx:100806221 671.774