Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1319 ATGTCAGCCGCGTCGCCTTCACCGGCAGCTTCTGGCGACACTCAACCGCCACAACAACCACCACCATCACCACCTGCTTCGCCTGCACCTGACACTTCAGCTTCGCCACCGCCGCTGTCGCCGACGCCACCACTACCTTCGACTTCGACCACGCCATCTCAGTCCCCGCCACCAACGACGACAACGCCATCTTCTCCTCCTCCAACCGCCCCGCCGCCGGTGCAACCGTCACCTACGCCGTCCGAACCACCGCCTCCTGCTTCACCTCCTCTTTCGTCTGGAAACCCGCCTCCAAGAGCTCCTCCACCAACCCCGCCGCAATCAGACCCTCCCCAATCGCCACCACCATCTCCGCCACCGCCATCACCGGCCCCACCGAGAAGCTCTCCACCACCATCGAACCCCCCTCCCACGCCTCCATCAAACCCTCCTAAGAGCACATCTCCGCCGCAACAGTCACCGCCACCGGAGAATTCACCACCCCCTGCACCTTCTCCTCCAACAACAGCCGCGCCGCCACCACGAGGCTCCCCTCCCCCGCCACGGTCTGCGCCACCACGAGGCTCCCCTCCCCCGCCACGGTCTGCGCCACCACCAAAAACTTCGCCTCCACCTCAACCATCCGTGCCGCCTCCGGCGAATTCCTCACCCCCAAGTCCCGCATCTGTGCCGCCGCCAAGATCATCGCCACCGCCGTCATCAAACCCTACTTCCCAAAATTCATCTCCTCCTTCGACTTCCACGTCTCCCCCAAGATCTGCACCTCCTCCTCCTCCTCCCACAACACCTAGCACTCAACCGGCTCCTTCAAATTTTCCACCTAGGTCATCATCATCCCCACCACCGCCAAATCAGTTGGCGCCGCCTCCGGCATCCATTCTTACTCCACCTGGAAACGGATCACAGACAGAGAATTCAGGTCCTACAGCTGGAGGAGGTGGTAATGGAATTGGTACCGCTGCAATAGTGGCTATCAGTGTAGTGGCGGGAATTCTGCTGTTTGGGATCATTGGAGTTGCAATTTGGTGCACGATAAAGAGGAAAAAGAAAAAGGTGCTGAGCAATGGTGGTTACGTCATGCCAACAACTCCTGCCTCATCTCCTGATTCAGATTCCTCATTCTATAAGACGCATTCTTCAGCTCCTCTTGTACAAAGCGGCTCTGGCAGTGATGTTTTGTATACACCATCTGATCCTGGTGGACTAGGCCACTCAAGGTCGTGGTTTTCGTATGAAGAATTAATCAAGGCCACAAATGGTTTCTCAACTGAAAATCTCTTAGGCGAAGGTGGATTTGGTTCCGTGTATAAAGGATACCTGCCGGATGGGAGAGAGATAGCGGTCAAACAGCTGAAAATTGGTGGTGGTCAGGGAGAGAAAGAATTCAAAGCTGAAGTCGAGATTATTAGTCGCATACATCATCGTCATCTGGTTTCACTGGTTGGATATTGTATTCAAGATACCAGAAGACTGCTTGTCTATGACTATGTCCCCAATAATACCCTTTATTTTCATCTACATGGGGATGGTAGGCCGGTGTTAGAGTGGGCAAACCGTGTTAAAATTGCAGCTGGTGCAGCTCGAGGGATAGCTTATCTCCATGAAGACTGTAATCCTCGGGTTATTCACAGGGATATCAAGTCATCGAACATTCTTTTAGATTACAACTTCGAGGCTAAAGTTTCAGATTTTGGGCTAGCAAAATTAGCCCTAGATGCAAATACACATATAACCACACGAGTCATGGGAACTTTTGGGTACGTAGCCCCTGAATATGCATCCAGTGGCAAATTGACTGAGAAGTCTGATGTATATTCCTTTGGGGTTGTGCTCTTGGAGCTCATTACTGGGCGGAAGCCAGTAGATACATCTCAACCCTTGGGAGATGAGAGTTTAGTTGAATGGGCTCGACCATTATTGAGTCATGTACTTGATAGTGGGGAGTTGGGGATTTTGACGGATCCAAGGCTAGAAAAGAATTATGTTGAAAGTGAAATTTTCTGTATGATAGAAGTTGCTGCATCTTGCGTTCGACACTCAGCTGCAAAGAGGCCTCGCATGGGACAGGTTGTTAGAGCTTTTGATAGCTTAGGAGCTTCTGACCTAACGAATGGATTGCGAGTTGGAGAAAGCGAGGCTTTTAACTCTGCGCAGCTATCGGAAGAGATAAGATTGTTTAGGAGAATGGCATTTGGTGATCAAAATTATAGCACCGATTTCTTTAGCAAGGGTAGTTCAAATACGTGA 2247 0.5171 MSAASPSPAASGDTQPPQQPPPSPPASPAPDTSASPPPLSPTPPLPSTSTTPSQSPPPTTTTPSSPPPTAPPPVQPSPTPSEPPPPASPPLSSGNPPPRAPPPTPPQSDPPQSPPPSPPPPSPAPPRSSPPPSNPPPTPPSNPPKSTSPPQQSPPPENSPPPAPSPPTTAAPPPRGSPPPPRSAPPRGSPPPPRSAPPPKTSPPPQPSVPPPANSSPPSPASVPPPRSSPPPSSNPTSQNSSPPSTSTSPPRSAPPPPPPTTPSTQPAPSNFPPRSSSSPPPPNQLAPPPASILTPPGNGSQTENSGPTAGGGGNGIGTAAIVAISVVAGILLFGIIGVAIWCTIKRKKKKVLSNGGYVMPTTPASSPDSDSSFYKTHSSAPLVQSGSGSDVLYTPSDPGGLGHSRSWFSYEELIKATNGFSTENLLGEGGFGSVYKGYLPDGREIAVKQLKIGGGQGEKEFKAEVEIISRIHHRHLVSLVGYCIQDTRRLLVYDYVPNNTLYFHLHGDGRPVLEWANRVKIAAGAARGIAYLHEDCNPRVIHRDIKSSNILLDYNFEAKVSDFGLAKLALDANTHITTRVMGTFGYVAPEYASSGKLTEKSDVYSFGVVLLELITGRKPVDTSQPLGDESLVEWARPLLSHVLDSGELGILTDPRLEKNYVESEIFCMIEVAASCVRHSAAKRPRMGQVVRAFDSLGASDLTNGLRVGESEAFNSAQLSEEIRLFRRMAFGDQNYSTDFFSKGSSNT* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1319 748 Pfam Protein kinase domain 422 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g1319 748 ProSiteProfiles Protein kinase domain profile. 421 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g1319 748 CDD STKc_IRAK 427 697 - -
Amo11g1319 748 SUPERFAMILY Protein kinase-like (PK-like) 403 692 IPR011009 -
Amo11g1319 748 SMART serkin_6 421 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g1319 748 ProSitePatterns Protein kinases ATP-binding region signature. 427 449 IPR017441 GO:0005524
Amo11g1319 748 MobiDBLite consensus disorder prediction 13 238 - -
Amo11g1319 748 Gene3D Phosphorylase Kinase; domain 1 401 496 - -
Amo11g1319 748 Gene3D Transferase(Phosphotransferase) domain 1 497 707 - -
Amo11g1319 748 MobiDBLite consensus disorder prediction 296 312 - -
Amo11g1319 748 ProSitePatterns Serine/Threonine protein kinases active-site signature. 541 553 IPR008271 GO:0004672|GO:0006468
Amo11g1319 748 MobiDBLite consensus disorder prediction 248 295 - -
Amo11g1319 748 MobiDBLite consensus disorder prediction 1 312 - -
Amo11g1319 748 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 138 744 - -
Amo11g1319 748 PRINTS Proline rich extensin signature 1 22 - -
Amo11g1319 748 PRINTS Proline rich extensin signature 64 89 - -
Amo11g1319 748 PRINTS Proline rich extensin signature 22 38 - -
Amo11g1319 748 PRINTS Proline rich extensin signature 40 57 - -
Amo11g1319 748 PANTHER BNACNNG34790D PROTEIN 138 744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1319 Amo-Chr11 45846660 45852514 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1319 305 748 Trihelix Transcription Factor Family AT5G38560 64.143 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Amo11g1319 Pkinase 3.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1319 - - gmx:100794393 754.977