Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1311 ATGGCAGCACTACTTTGCTTCCTCTTACACTTCTTTCATAGGAGACTATGTTGCAAGAGCCCCCTCTTAATAGATTGGCCTATTGTTGGCATGTTACCAATAGTGTTATGGAACTTGTTCCGGATCCATGATTTCATAACCGATGTCTTGAAACAAGAAGGCAAAACCGGCGAGTTCATGGGACCATGGTTCACCAACATGAACTATTTGGTCACTAGTGACCCCATGAATGTTCATCACATAATGAGCAAGAGTTTTGACAACTATGTCAAGGGTTCTGAATTTCGTGACATCTTCCAAATTTTTGGAGATGGTATTTTTACCACGGATTCGGAGACTTGGAGGTACCATAGATCTTTGCTTCTTTCTTTGGTTAAGAATAGGAGCTTCGAGATCTTTCTAGAGAAAACGATTCAGAAGAAGGTGGAAGCTAGCTTGATTCCTGTATTAGAACACGTGCTACAACAACGTGTTGAGGTTGATCTACAAGATGTCTTCAATCGCTTCACATTCGACAACATTTGCAACATTGTTTTAGGGTATGATCCTAATTGTCTTTCTATTGAGTTCCCTGAAGTTGCATGTGAGAAGGCTTTTAATGAAGCTGAAGAGTCGTTATTCTATAGGCATGCTGTTCCAAAGAGTGTTTGGAAGCTTCTAGAAAGGCTTCAAATAGGTCAAGAGAGAAAGATGAGTGAAGCTTGCAAGGTGTTTGACCAATTCATATACTCTTGCATAGCATCAAAGAGAGAAGAGATAAGCAAGTACAACAAAAGTAGTCAAATAGATGAAGCTCAAGTTGACTTGCTTAGTGCTTTGATGATGATGAGAGAACAAGAACAAGAAAAGGGTCAAAGTCAAACATTATTAGTCAACGATGACAAGTTTCTAAGAGACTCAACTTTCAATATTTTTGTGGCCGGAAGAGATACTATAACTTCAGCTCTTACTTGGTTCTTTTGGCTTGTTGCTACAAACCCATTAGTAGAAGCTAAGATTCTTGATGAGATCAAAGAAAATTTTGGATCCAATAATGATGAAATGGAACACAAAGTTTTTGGCATGGAGGAGGGTAAAAGGCTAGTTTATCTCCATGGAGCTCTTTGTGAATCTTTGAGGCTATTTCCTCCTATTCCTTTTGAGAGGAAGCAACCAATCAAAAGTGACATACTCCCAAGTGGACATCATGTGAATCCAGGTACAATGATCTTACTTTCTTTGTTTGCAATGGGAAGATTTGAAGAGGTATGGGGAAAAGATTGCTTGGAGTTCAAGCCAGAGAGATGGATCTCTAATAAGGGTAGTATTGTTCATATGCCATCTTATAAGTTTATTAGTTTTAATGCGGGTCCAAGAACTTGTTTGGGAAAGGACATATCTTTTATTCAATTGAAGATGGTGGCAGCTTCTATTTTGTGCAATTATCATATTCATGTGGTGGAAGGTCATCAAGCTATTCCTAGTCACTCAATTGTTCTTTTAATGAAGGATGGCTTGAAGGTTAGGGTAACTAGAAGATGCTTGTTTTGA 1530 0.3856 MAALLCFLLHFFHRRLCCKSPLLIDWPIVGMLPIVLWNLFRIHDFITDVLKQEGKTGEFMGPWFTNMNYLVTSDPMNVHHIMSKSFDNYVKGSEFRDIFQIFGDGIFTTDSETWRYHRSLLLSLVKNRSFEIFLEKTIQKKVEASLIPVLEHVLQQRVEVDLQDVFNRFTFDNICNIVLGYDPNCLSIEFPEVACEKAFNEAEESLFYRHAVPKSVWKLLERLQIGQERKMSEACKVFDQFIYSCIASKREEISKYNKSSQIDEAQVDLLSALMMMREQEQEKGQSQTLLVNDDKFLRDSTFNIFVAGRDTITSALTWFFWLVATNPLVEAKILDEIKENFGSNNDEMEHKVFGMEEGKRLVYLHGALCESLRLFPPIPFERKQPIKSDILPSGHHVNPGTMILLSLFAMGRFEEVWGKDCLEFKPERWISNKGSIVHMPSYKFISFNAGPRTCLGKDISFIQLKMVAASILCNYHIHVVEGHQAIPSHSIVLLMKDGLKVRVTRRCLF* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1311 509 Pfam Cytochrome P450 35 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g1311 509 Coils Coil 262 282 - -
Amo11g1311 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Amo11g1311 509 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g1311 509 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g1311 509 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g1311 509 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g1311 509 Gene3D Cytochrome P450 12 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g1311 509 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g1311 509 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g1311 509 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g1311 509 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g1311 509 PANTHER CYTOCHROME P450 4 506 - -
Amo11g1311 509 SUPERFAMILY Cytochrome P450 25 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo11g1311 509 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1311 Amo-Chr11 45467731 45469265 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1311 3 508 Cytochrome P450 AT4G39490 46.833 1.08e-169 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1311 - - aprc:113867564 709.138