Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1292 ATGCTCTCTGAAACGAAGAAGCCTACGAAGAAGAGTGGGAGGCACATTCTGAAACTTGCCTCGTTTCTTATTAAACGCACTCTCTCCAATGTAAAACGCATGCAGGGTGAAAGATTGATGGAAGAAGTAGCAATCATTGGAGGGTTGATCGGTGTGCAGTTTATGGCGGCAGGGAACGCTGTTTTGATGAGCTTTGTTATGTCTTTGGGACTCAAATCTCTCACCATTGTTACATTCATGTCCCCTGCTACATCTCTTTTGCTCTCCCCTCTTGCCTTCTACTCTGAAAGGAGCCTGTGGCCCAAGAAATTCAGTTTCAAGTTGATTTTGCGGTTGATCTTGCTTTCCTTGGGAGGGACAACATTCCAGGTTTTGATGCTGAAAGGAATGAATCTAACCTCACCAGCAATGGGGACTGCCATGCCAAACGTTGCCCCTGGACTTATCTTCATCATTGCTTGGATCTTTCGGTTGGAAAAAGTGAACATAAAATCGACATATAGTAGAGTAAAAATCATGGGGACAATGCTTTGTGTGGTAGGGGCTTTTGCAATGAGCATAATGCAAAGCATGTCCACCAACGCAGCCAAAGGAGATGCAACATTAGTTCATTATATATCAGATCCAACATCAGTTGATGTTGTCTTTGACAAACAGAAGATATTGGGTTGCATCTATCTTCTACTCGCAATTTCTTTATTGTCAAGTTCCCTAGTCTTGCAGGCTTTTATTTTTAGAGATTTTCCGGCACCCATATCGATGTGCGTGATCACATCCTTTTTGGGCACGTTCATAACAGCAGCATTTCAATTCCTTGAAGATCACGAAATCAAAACTGGTTCGGATGTTCTTAGTGCCCGAAACCTCATCATGTATTTTCTTCTGGAAGGTGCAGTAAATGGAGTGTGCATAAGCTTCAGTAGTTGGGCAATAAAGAAGAAAGGGCCAGTTTTGGTGTCCATGTTCAGCCCCATTGGCACCGTATGCTCTGCCATTTTCTCTGTTGTTACCATAGGAGTTACCATCAGTGTTGGAAGCTATGGGGGAATGTTTATAATGTTCACTGGGCTTTACTTTTTCCTTTGGGCTAAAGGGAAAGAAGAAGACATTGAAGGCAGTGGCAAACAAGGTGAATATGATATTGAGAAGCCTCTCTTAGAATGA 1164 0.4278 MLSETKKPTKKSGRHILKLASFLIKRTLSNVKRMQGERLMEEVAIIGGLIGVQFMAAGNAVLMSFVMSLGLKSLTIVTFMSPATSLLLSPLAFYSERSLWPKKFSFKLILRLILLSLGGTTFQVLMLKGMNLTSPAMGTAMPNVAPGLIFIIAWIFRLEKVNIKSTYSRVKIMGTMLCVVGAFAMSIMQSMSTNAAKGDATLVHYISDPTSVDVVFDKQKILGCIYLLLAISLLSSSLVLQAFIFRDFPAPISMCVITSFLGTFITAAFQFLEDHEIKTGSDVLSARNLIMYFLLEGAVNGVCISFSSWAIKKKGPVLVSMFSPIGTVCSAIFSVVTIGVTISVGSYGGMFIMFTGLYFFLWAKGKEEDIEGSGKQGEYDIEKPLLE* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1292 387 Pfam EamA-like transporter family 49 186 IPR000620 GO:0016020|GO:0016021
Amo11g1292 387 Pfam EamA-like transporter family 222 361 IPR000620 GO:0016020|GO:0016021
Amo11g1292 387 PANTHER OS11G0588100 PROTEIN 42 386 - -
Amo11g1292 387 PANTHER WAT1-RELATED PROTEIN 42 386 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1292 Amo-Chr11 44649099 44658950 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1292 8 376 Nodulin-like Gene Family AT5G47470 49.333 1.76e-117 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1292 - - gmx:100809182 443.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g2491 05 52712239 52714552 Amo11g1292 11 44649099 44658950 PCT
Amo11g1292 11 44649099 44658950 Amo05g2491 05 52712239 52714552 PCT