Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1281 GGGCTCCCTGCTTCCCTCTTCACTCTCCTCTCTCAAGCTCTCTCGCATTTTCAGAGCACCGGCGGCGGCAGCGGGATTCCCTCACACATACGCGGCGGCACTCGTCTCTCCTCTCTCACAGCTCTGCCTCTCTGCGGCGGCAAGTCTCCCCACATTCGCGGCGGCGCGCTCGTCTCTCCTCTCTCACGGATCATCTCTAGCTCTCTCGGCGGCGGCAAGCTCCTCCTCTTGGTAACTGTGTTAGGTTGTGTTGACAACTCTCAGGCCAAACGTGCTCGCATCATCGAGTTATCTCGCAGATTGAAGCATAGAGGACCTGATTGGAGTGGATTGCATTGCCATGGAGATTGTTATCTTGCTCATCAAAGGCTTGCTATTGTAAATGGGGAGATCTATAACCATAAGGAACTGAGACAGAAATTGAGTTCCCACCAGTTTCGAACTGGAAGCGACTGTGAAGTCATTGCTCATCTTTACGAAGAGTATGGAGAAGAATTTATTGATATGCTGGATGGGATGTTCTCCTTTGTGCTTCTTGACACAAGAGATAAAAGCTTCATTGCTGCTCGTGATGCTATAGGCATTACCCCTCTTTACTTGGGATGGGGGCTTGATGGATCGACATGGTTTGCGTCTGAAATGAAAGCTTTAAGTGATGATTGTGAGAGATTCATATCTTTTCCGCCAGGGCATATATATTCCAGCAAACAGGGAGGATTAAGATGGTACAATCCACCATGGTTCACAGAGCAAATTCCATCAACACCCTATGATCCTCAGATCCTACGTCAAGCCTTTGAAAAGGCTGTGCTTAAGAGGTTGATGACTGATGTACCTTTTGGCGTTCTTTTGTCGGGAGGACTTGACTCATCGCTTGTCGCTGCCGTGACCAATCGTTTTGTGGCTCAATCTGCAGCTGCACAACAGTGGGGATCGCAGTTGCATACTTTCTGTATTGGTTTAAAGGGCTCTCCAGATTTGAAATTTGCAAAAGAGGTAGCAGATTATCTTGGTACTCGACATCATGAACTTTATTTCACAGTTCAGGAAGGTATAGATGCACTTGAAGAAGTCATTTACCACATTGAAACATATGATGTAACGACTATCAGAGCAAGTACTCCAATGTTCCTTATGTCCAGAAAAATCAAATCCATGGGAGTGAAAATGGTTCTTTCGGGAGAAGGTTCAGATGAAATATTTGGAGGTTACCTATATTTCCATAAAGCACCTAATAAGGAAGAGTTTCATGAAGAYACATGTCGAAAAGTAATAGCAAATTGTTACATCATCATGTTTGATTCAATGCAATTTGAAAATTTAATGCGCTTAACCTATTAA 1341 0.4489 GLPASLFTLLSQALSHFQSTGGGSGIPSHIRGGTRLSSLTALPLCGGKSPHIRGGALVSPLSRIISSSLGGGKLLLLVTVLGCVDNSQAKRARIIELSRRLKHRGPDWSGLHCHGDCYLAHQRLAIVNGEIYNHKELRQKLSSHQFRTGSDCEVIAHLYEEYGEEFIDMLDGMFSFVLLDTRDKSFIAARDAIGITPLYLGWGLDGSTWFASEMKALSDDCERFISFPPGHIYSSKQGGLRWYNPPWFTEQIPSTPYDPQILRQAFEKAVLKRLMTDVPFGVLLSGGLDSSLVAAVTNRFVAQSAAAQQWGSQLHTFCIGLKGSPDLKFAKEVADYLGTRHHELYFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSMGVKMVLSGEGSDEIFGGYLYFHKAPNKEEFHEDTCRKVIANCYIIMFDSMQFENLMRLTY* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1281 446 PANTHER ASPARAGINE SYNTHETASE [GLUTAMINE-HYDROLYZING] 3 77 426 - -
Amo11g1281 446 Gene3D HUPs 247 443 IPR014729 -
Amo11g1281 446 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 91 248 IPR029055 -
Amo11g1281 446 Pfam Glutamine amidotransferase domain 124 218 IPR017932 -
Amo11g1281 446 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 252 418 - -
Amo11g1281 446 CDD AsnB 85 244 IPR033738 -
Amo11g1281 446 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 77 244 IPR029055 -
Amo11g1281 446 PANTHER ASPARAGINE SYNTHETASE 77 426 - -
Amo11g1281 446 Pfam Asparagine synthase 262 417 IPR001962 GO:0004066|GO:0006529
Amo11g1281 446 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 78 238 IPR017932 -
Amo11g1281 446 CDD Asn_Synthase_B_C 263 414 IPR001962 GO:0004066|GO:0006529
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1281 Amo-Chr11 44249202 44253658 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1281 128 217 PRT Gene Family AT2G16570 38.000 3.85e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1281 K01953 - gmx:732660 637.876