Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1243 ATGGATGTGCTTTACAGTGACAAGACAGGAACACTCACACTTAACAAGCTTAGTGTTGACAAGAACTTGATTGAGGTCTTTACTAAAGGAGTGAACAAGGATCATGTGATCCTTCTCGCCGCAAGAGCTTCCAAGACTGAAAACCAGGATGCCATTGATGCTGCTATTGTTGGAATGCTTGCAGATCCTAAAGAGGCAAGGGCTGGAATCAGAAAGGTTTACTTTTTACCTTTCAATCTTGTTGATAAGAGAACTGCTCTGACTTACATTGGTGCTGATGGAAACTGGCACCGTGCAAGCAAAGACGAACGACTAAATGACATTTCTGGGAGTGCATATTATGTTGCACCAGAGGTACTTTACAGGTCATATAGTGTGGAAGCAGAAATATGGAACCAGAGGTACTATGGAGCAAGTAACAGAGCAGTGTAA 432 0.4259 MDVLYSDKTGTLTLNKLSVDKNLIEVFTKGVNKDHVILLAARASKTENQDAIDAAIVGMLADPKEARAGIRKVYFLPFNLVDKRTALTYIGADGNWHRASKDERLNDISGSAYYVAPEVLYRSYSVEAEIWNQRYYGASNRAV* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1243 143 Gene3D - 17 101 IPR023299 GO:0000166
Amo11g1243 143 Gene3D - 2 16 IPR023214 -
Amo11g1243 143 PANTHER CALCIUM-TRANSPORTING ATPASE 1 102 - -
Amo11g1243 143 PANTHER PLASMA MEMBRANE ATPASE 1 102 - -
Amo11g1243 143 ProSitePatterns E1-E2 ATPases phosphorylation site. 7 13 IPR018303 -
Amo11g1243 143 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 11 101 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1243 Amo-Chr11 42090834 42092254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1243 1 101 Primary Pumps ATPases AT2G24520 82.178 9.93e-54 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1243 K01535 - aip:107629531 190.274