Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1229 ATGGAGCAGCATACAGTAGTCCAAGCACTATATATATATATATACACACTGTATCATATTACGTCCATGGATACATCAATTTTTGAAGAAGCATCGTATGACATTGCATATGACGTGAGTGAGCATTCTAATTCCACCGACGTTAATATTCCGTCTTTGAGTGAAGATGACACACTACTTGTGAAACAGAGGAAAGAATTTGAAGTCGTTATTCAGAAAAAAGATAATGCTACGGTAAGTAATAATGAGTTGCAATTCCCGGATCACACTGGAATTTCAATAGAGGAAATCCCGTACGTAGGATTGAGATTTGATTCATTGCAGCGGGCACAAGAATTCTATTGTAATTATGCAAAGAAAGTTGGGTTTGTGACTGGGATTAGGAATACCAACTTTGACAAGACCAGGAAGGAATTAAAGGCAGCAACGCGGGTAAAGAGAATAACAACAGCCGGGTGCAAAGCAAGGATGTACGTGATGCTTGATAGGCAGAATGATAATTGGATGGTATCCAAATTAGAATTGAAGCACACCCACACGTATTCTGCAAAGCAAGTTGTGCATTACAGTGAGTACAGGGAATTGACCATGCATGCCAAGAATGTCTTCCCAAATACTAGACACCGATGGTACATATGGCACATAATGAAGAAGATACCACATAAGTTCGGAGGATATGCTCAGTACAGAAAAATAGATGCTAAAATGCATGGCACTATTTGGAATGCCCATTCTGAAGAATCTTTTGAGAAGGATTGGTACCTTTATGATGAGCGTCGAATGTGGGTTCTAATATATTTTCAAGGTGAATTTTGGAGTATGCACGCCTTTTTCGGTGGTTACCTGCATTGCAAAAGTGGACTGGTTCAGTTCGTGCATGAGTATGACAATGTGCTTGGGAACAAAGAGCAAATAAAACTGGAGGACGATGCTACAGACTCTAAAGGAGTTCGTGAGTACACAACCTCTAAGTTTAGGGAAGTTCAACATGAATTCAGGAAAAGAGGGGATTGTTTAGTCCGTGGTGTCACTCAAGAGGGTGATTTGTTTCGAGTGACCGTGAACGAGCAATACCTACTATATGGGGAGCCTAGGTCCTGGACGTATAGTGTCGAGTTTGACCCCAAGACACACAAGGTTCGGTGCGAATGCAACATGTTTGGATCAAGAGGTATTCTTTGTTGCCACTGTCTTGTTGTGTTCTTTTATTATGGAGTAGACACAGTACCATCTTGCTACGTGATCCCTCGATGGAGCAAGAATGTACAGCGAAAACACACTTTCATCAAGAGCAGCCACGACGAGAAGTCAAAGTTGCTTGATTATCATGTGAACTTGGGGTCCAGGCGTGTTCCAACTACACAAAATAGCACGGTCACACAGCGTCCTTCAAAGGTTTCAACAAAGGGTCGGCCGAGATTGAAGAGGCCTGGATCTGAACTCGACACCTCAATCAAGAAATCTATGCAAAGAAAGAAGAAGAATCCACTGCCAGAAGTTGATCAAGCAATGAATCAAGATATAGTGGTGGGTTATGATGGGAGAGCGAATGAATCACAGGAACATGGTGGGTTCTTATCGTTGTTAAACTCATTTCAAACTACTTAG 1608 0.4167 MEQHTVVQALYIYIYTLYHITSMDTSIFEEASYDIAYDVSEHSNSTDVNIPSLSEDDTLLVKQRKEFEVVIQKKDNATVSNNELQFPDHTGISIEEIPYVGLRFDSLQRAQEFYCNYAKKVGFVTGIRNTNFDKTRKELKAATRVKRITTAGCKARMYVMLDRQNDNWMVSKLELKHTHTYSAKQVVHYSEYRELTMHAKNVFPNTRHRWYIWHIMKKIPHKFGGYAQYRKIDAKMHGTIWNAHSEESFEKDWYLYDERRMWVLIYFQGEFWSMHAFFGGYLHCKSGLVQFVHEYDNVLGNKEQIKLEDDATDSKGVREYTTSKFREVQHEFRKRGDCLVRGVTQEGDLFRVTVNEQYLLYGEPRSWTYSVEFDPKTHKVRCECNMFGSRGILCCHCLVVFFYYGVDTVPSCYVIPRWSKNVQRKHTFIKSSHDEKSKLLDYHVNLGSRRVPTTQNSTVTQRPSKVSTKGRPRLKRPGSELDTSIKKSMQRKKKNPLPEVDQAMNQDIVVGYDGRANESQEHGGFLSLLNSFQTT* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1229 535 MobiDBLite consensus disorder prediction 451 467 - -
Amo11g1229 535 ProSiteProfiles Zinc finger SWIM-type profile. 369 405 IPR007527 GO:0008270
Amo11g1229 535 MobiDBLite consensus disorder prediction 473 498 - -
Amo11g1229 535 MobiDBLite consensus disorder prediction 451 498 - -
Amo11g1229 535 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 200 454 IPR031052 GO:0006355
Amo11g1229 535 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 74 181 IPR031052 GO:0006355
Amo11g1229 535 PANTHER OS03G0843700 PROTEIN 200 454 - -
Amo11g1229 535 PANTHER OS03G0843700 PROTEIN 74 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1229 Amo-Chr11 41712796 41717123 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo11g1229 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1229 - - ahf:112772717 488.034