Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1192 ATGGAACAAAAAAAAAGAAGAGGAAGAAGAAGAAGAAGCACAGCCCAATTAGAGATATGGAAATACATTTTTGGGTATGTGGAGTTGGCAGTTATAAAATGTGCCATTGAACTTGGCATAGCTGATGCCATAGAGAGCCATGGAAGTCCCATGACACTCTCCGAAATTTCATCTACTTTAGGCTCTGACCCTTCCCTTCTTAACCGAATCTTGAGATTCTTAATTAACAGAAAGATATTCAAAGCCGATAAAAATTCAGATTCCACTACCACTTATGCCAACACGCCGTTATCTCGCCGTTTCCTGAAAAACGGGCAGCAAAGCATGGCGGCGTTCCTCCTCCTGGAGAGCAGCCCGGTCATGCTTGCACCTTGGCACAGCCTAAGCGCCCGTGTTTTGGCAAACGGTGGAATAAACTTCCCCTTCCAGAAGGCACACGGCGAAGACGTGTGGGGCTACGCCGCGGAGAATCCGGGTCACAGCAACCTTATAAACGAGGCAATGGCGTGCAGTGCTAAGATGGTGGTGCCTGCCATTGTTGAAGGTTGTGGCGACGAGGTGTTCGAAGGCTTGAAAACGTTGGTGGATGTTGGTGGTGGAACCGGCACCGCGTTGCGCGCTTTGGTTAAGGCTTGTCCTTGGATTCATGGAATCAATTTTGATCTTGCTCATGTCATTGCTGTGGCTCCCAAGATTGAAGGAGTCGAAAATGTGGCTGGTGACATGTTTCTAGGTGTTCCCAAAGCTGATGCTGCTTTTCTTATGTGGGTTTTGCATGATTGGGGTGATGAGGAGTGCATCCAGATCTTGAAGAAGTGCAAGGAAGCCATTCCAAAGGAAAATGGAAAAGTGATCATTGTGGAGGCAGTGATTGAAGAGGGAGCAATAAAGCAAGGAAATTTAAAGGACGTAGGGTTGATGTTGGATATGGTAATGATGGCGCACACAAGCTTCGGGAAAGAGAGGACACTCAAAGAGTGGGAATATGTTATCAAAACGGCTGGATTTACTTCATACACTGTGAAAAGCATCGATGCTGTGCAATCTGTGATGTTAGCCTACCCATGA 1068 0.4682 MEQKKRRGRRRRSTAQLEIWKYIFGYVELAVIKCAIELGIADAIESHGSPMTLSEISSTLGSDPSLLNRILRFLINRKIFKADKNSDSTTTYANTPLSRRFLKNGQQSMAAFLLLESSPVMLAPWHSLSARVLANGGINFPFQKAHGEDVWGYAAENPGHSNLINEAMACSAKMVVPAIVEGCGDEVFEGLKTLVDVGGGTGTALRALVKACPWIHGINFDLAHVIAVAPKIEGVENVAGDMFLGVPKADAAFLMWVLHDWGDEECIQILKKCKEAIPKENGKVIIVEAVIEEGAIKQGNLKDVGLMLDMVMMAHTSFGKERTLKEWEYVIKTAGFTSYTVKSIDAVQSVMLAYP* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1192 355 SUPERFAMILY "Winged helix" DNA-binding domain 13 105 IPR036390 -
Amo11g1192 355 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 355 IPR016461 GO:0008168
Amo11g1192 355 CDD AdoMet_MTases 193 287 - -
Amo11g1192 355 Gene3D - 2 101 IPR036388 -
Amo11g1192 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 106 353 IPR029063 -
Amo11g1192 355 Gene3D Vaccinia Virus protein VP39 103 354 IPR029063 -
Amo11g1192 355 Pfam Dimerisation domain 31 74 IPR012967 GO:0046983
Amo11g1192 355 PANTHER 3'-HYDROXY-N-METHYL-(S)-COCLAURINE 4'-O-METHYLTRANSFERASE 2-LIKE 9 354 - -
Amo11g1192 355 PANTHER O-METHYLTRANSFERASE 9 354 IPR016461 GO:0008168
Amo11g1192 355 Pfam O-methyltransferase domain 125 336 IPR001077 GO:0008171
Amo11g1192 355 PIRSF O-mtase 1 355 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1192 Amo-Chr11 39779303 39780726 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1192 32 341 Monolignol Biosynthesis Gene Families AT5G54160 38.245 1.24e-66 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1192 K22588 - gmx:100782951 469.544