Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1187 ATGGTGGATAAGCGGCACAAAGTTCCTGCCTTCCGTGATTTTCCGAAAGGGTGTGGCTCAAACCCTTCAAGAACCGCACATGGTGATGCTGCAAAGGTTGTCCCTGGGAACCACTATAAGCGGGTTCCAGCTTTTAGGGACTTTCCTCCATTGTGTGGACCAAATGCTTCTTCACATCTTAGTGAAGGTGAGGGTGAAACAGCAATTGATGCAGAAGAGGAGGTGGAAAAGAATGTTCATTGTGATGGTGGAAAGGTACTGGATCTAGTTCAAGGTGATTCTGGTGGGAATGGTGTAGAAAAAGAGAAGGAGCTTGATGTAATTCGAACATGTGTTACGGTTCCTAAGGATGGCAACCGGGATAAGGTTCAAATGAATTCTTATAATTTGAGGGTTTCATCTCGCAGGGTGGTGCTAGCACTGATGGCTGAATCTGAATGTCCATGGAGGAATGCTGCAAGAAAAAAGGGAAAGAAGCCTTTAAAGAAGAAAAAGGGGAATGACAATTCTGAAAACATTGATGAATTTCAAGTTGTCAACAAATCACATGGTTCCAAGGTAAAGAATCCGGCCTTTGATCAACATGATTTGATTGATTTCAATGGTCATCAGGACAATGATTCAAGTGTGACTAGAAATAAGGTAAGGGAAACATTGCGCCTTTTTCAGGCAGTTTATAGAAAGCTTGTACACGAAGAAGAAGCGAAGCTAGAAGGTAAGGCAAGTAGCTTTAGGAGTGTTGATTTACGAGCAGCTGAGATCCTTATGGGCAAAGGGAAATATCTTAACACCAACAGGATATTGGGATCTGTCCCTGGGGTTGAAGTTGGCGACGAATTTCAGTATAGGGTAGAGCTTGCCATGGTTGGTCTTCATCAGCGGATTCAAAGCGACATAGATTATGTTATGCATAATGGGAAGACCCTCGCCATGAGTGTTATCACATTGGGAGGCTATGAGGACGAGTTAGATGATTCAAATGTCTTGATATACACAAGTTTGGTTGGAAATAATACTGATAAAGAAGTCGAAGATCAGAAGCTTGAGCAGTGCAACCGTGCTTTAAGGAACAGCATTGACGAAAAGAATCCTGTTAGGGTGATAAGGGCCACTGAATCAATGCACGGAAAGGGTAAGAAATATGTCTATGATGGACAATATGTGGTTGAGAATTGTTGGCAGGATGATGGGCCGCACGGTTCGCCGGTTCTTAGATATCGGCTGCAAAGGATCCCAGATCAACCGGAGCCTTCTTGGAAAGAAGTAAAGAAATCTGAAAATTTGAGAGATAGAGAAGGTCTATTTGTTCATGACATTTCAAATGGGAAAGAGCTCATTCCAATTCATGCTCTCAACACCATAGATGACCAAAATGTTCCATCATTTGTGTATGTTACAAGAATGATATATCCAAATTGGTGCAATCCTATTCCTCGGAAAGGCTGTAATTGTGTTGGAACATGTTCAGAATCAGAAAAATGTCCTTGTGCTGCGAAAAATGGTGGTGATATCCCATTCAACCATGATGGGGCCATTGTAGAAGCAAAGCCTCTAATCTACGAGTGTGGACTTTCTTGCAAGTGCCCTTCAACATGCCACAATAGAGTTAGCCAACATGGCGTGAAGTTCCAACTCGAAGTCTTCAAAACCGATTCAAGAGGTTGGGGTGTGAGATCATTGAATTCAATCCCTTCAGGGAGTTTTATCTGCGAGTATCTGGGGGAGCTTCTTGGAGAGGATGAAGCTGAAGAAAGAGTTGACAATGATGAGTATCTTTTCGATATCGGCAATAATAACCAAAAGAGCCATGCCCTTTGGGATGAACTCTCAGTGGTTATGCCTGATGCACACTCAAATTCTTCTTGTGAAGTTGTGGAGGATGGTGGATTCACCATTGATGCTTTACACTATGGTAATGTTGGAAGATTCATCAACCATAGTTGCTCACCTAATCTGTATGCACAGAGTGTGCTTTATGATCATGATGATAAGAGGATTCCCCACATAATGCTGTTTGCGACTGAAAATATTCCACCATTGCAAGAGTTGACTTATGATTACAATTACAAGATAGATGAGGTTTTTGACTCTCATGGGAACATCAAGAGGAAGAATTGCTATTGTGGTTCCATGGAATGCACTGGTAGGATGTATTGA 2157 0.4219 MVDKRHKVPAFRDFPKGCGSNPSRTAHGDAAKVVPGNHYKRVPAFRDFPPLCGPNASSHLSEGEGETAIDAEEEVEKNVHCDGGKVLDLVQGDSGGNGVEKEKELDVIRTCVTVPKDGNRDKVQMNSYNLRVSSRRVVLALMAESECPWRNAARKKGKKPLKKKKGNDNSENIDEFQVVNKSHGSKVKNPAFDQHDLIDFNGHQDNDSSVTRNKVRETLRLFQAVYRKLVHEEEAKLEGKASSFRSVDLRAAEILMGKGKYLNTNRILGSVPGVEVGDEFQYRVELAMVGLHQRIQSDIDYVMHNGKTLAMSVITLGGYEDELDDSNVLIYTSLVGNNTDKEVEDQKLEQCNRALRNSIDEKNPVRVIRATESMHGKGKKYVYDGQYVVENCWQDDGPHGSPVLRYRLQRIPDQPEPSWKEVKKSENLRDREGLFVHDISNGKELIPIHALNTIDDQNVPSFVYVTRMIYPNWCNPIPRKGCNCVGTCSESEKCPCAAKNGGDIPFNHDGAIVEAKPLIYECGLSCKCPSTCHNRVSQHGVKFQLEVFKTDSRGWGVRSLNSIPSGSFICEYLGELLGEDEAEERVDNDEYLFDIGNNNQKSHALWDELSVVMPDAHSNSSCEVVEDGGFTIDALHYGNVGRFINHSCSPNLYAQSVLYDHDDKRIPHIMLFATENIPPLQELTYDYNYKIDEVFDSHGNIKRKNCYCGSMECTGRMY* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1187 718 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 122 718 IPR025794 GO:0016571
Amo11g1187 718 ProSiteProfiles Post-SET domain profile. 702 718 IPR003616 -
Amo11g1187 718 SMART set_7 543 694 IPR001214 GO:0005515
Amo11g1187 718 Pfam SAD/SRA domain 268 414 IPR003105 -
Amo11g1187 718 Gene3D SET domain 431 718 IPR046341 -
Amo11g1187 718 SMART preset_2 436 527 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Amo11g1187 718 SMART G9a_1 264 414 IPR003105 -
Amo11g1187 718 Pfam SET domain 554 688 IPR001214 GO:0005515
Amo11g1187 718 SUPERFAMILY SET domain 430 695 IPR046341 -
Amo11g1187 718 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6-LIKE ISOFORM X1 206 717 - -
Amo11g1187 718 ProSiteProfiles Pre-SET domain profile. 480 540 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Amo11g1187 718 ProSiteProfiles SET domain profile. 543 688 IPR001214 GO:0005515
Amo11g1187 718 Pfam Pre-SET motif 439 535 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Amo11g1187 718 ProSiteProfiles YDG domain profile. 269 410 IPR003105 -
Amo11g1187 718 SUPERFAMILY PUA domain-like 251 425 IPR015947 -
Amo11g1187 718 Gene3D - 251 430 IPR036987 -
Amo11g1187 718 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 206 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1187 Amo-Chr11 39680610 39683198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1187 212 715 Su(var)3-9 homologs AT5G04940 38.491 1.65e-110 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Amo11g1187 SAD_SRA 1.6e-42 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1187 K11420 - adu:107484449 1421.76