Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1170 ATGGTGAGAGAGCAAACGGCCGTTTCCTTCTACAACAAGATGCGGGAATCGGCATCCAAGTCGTCCTCCACGCCGCTCCTCATCTTCCCTTCAACCTCCGATGTCGACTCACTTTGCGCCCTCAAGATCATCTTCCACATCCTCGAGTCCGATGGCCTCCAATACTCCTGCTACCCGGTCTCTTCCTTCAACGAGATCTACAACTACGCCGGCCCCACCCTTGCCTCCGCCGCTGAAAACGGTGACTATGTCTCAATGCTCTTAATCAACTGGGGCTGCCACAGGGACCTACAGAAGACTCTCAATTTGCCKCCCTCCGCCCGCATCTTTGTTGTMGATAGCCACCGCCCCATCCATCTCAACAATATCAGCCAAGAAAATGAATCAGTGGTTGTTTTGTTTACTGATGAGGATGAGAAGATAGCGGATCTTGTTTACAGTTTTGATATTACCCTTGCTGAGTTGGCCAATGCGAGCTACATGTGCAGGGAAAGCAATGAATTGGAAGAATCCGAAGAKGATTCGGATGAATCGGATGAGGAAGATAGCGAAAATAGCAACGATGATGAAGATCAACAGGGATCTAGGAGAAAGAGGAGAAGGGTTTCGGATTCTGATCCGGTTCAGTTTTTTAAGAAGCAGGTTAAGAGGTATTATAAGTTGGGGACTTTTCACGGGAAGCCTTCCGGGTGTTTGATGTATGAACTGGCTGATTCGCTACGTAAGAATACAAATGAGTTGCTGTGGTTGTCTTGTGTRTCTCTTACTGACCAGTTTGTCCATGAGAGGTTGAGTGATGAGAGATACYGTGACGGTGTGGCGGAGCTAGAGGACCGTATWAGATGTGCTGGGAACTTGGATGTKGTTACATCAGTCACTCTCAAGGATGGGACTAAGATTCGGGCACCACATTCCTGCAAGATTGCTTGTGAGGATGAGCCTAGGCTTATGTTGTTGAAGGAGTGGAGCTTGTTTGATTCAATGTTGTGCTCATCCTACATTGCAACCAAGTTGAAGACTTGGAGCGATAATGGGGTCAAGAAGCTGAACCTTCTGCTGGCTAGGATGGGGTTTGCACTTGTCGATTGCCAGCAGAAGTTCCAGTACATGAGTATGGAGGTAAAGAAGAAGATGAAACATGAATTTGAGCGGTTTTTGCCAGAATATGGACTYACTGATTTCTATTATAGGAGTTTCTTGAGGATACATGGGTATAGCTCAAGGGTGTCTGCCGCGGATGTGGTGTATGGAGTGACTGCCCTACTTGAATCGTTTGTGAAATCAGATGGYTCWTGTGCATCCAAGCAATTCGGGGTGGCTTATGATGCATTGTCTTTAAGCAATCTTGATAAGCTCAAGGCCGGGATGCAACACGCAATTAGGATTCAGAGAGCTATCTTAAGGCAAGGTAGCACTGCGATTACAAAGAATGGGTGTATAAGAAGTGGGAGGAAGTTTCGGTGGGTGAAGCTTGAGGATTCGGTTGACACCAAGTTGCTTGGTTATCCGCAGGCATTGACTAAGTTCTGTTATTTTCTTATGGATGCTTTGAGAGAGAAGGGGGCACGGATGAAGCCTTTGCTTTGTGCTTGCTTGTCTCAAGAACCCAATAGGATGTTGATTGTAGGCGTTTATGGGAAGCCTCGCCTGGCCGGAGCTCAGGGGAATGCATTTGGGATTGCGTTTAGGAATGCTGCTGAGGAGATTGGAGCAGAGTTCTTCCATGAGTTGTTTGAGTCATCATGGATTCTTCTTGACTCTTCCACTGTAAATTCGTTCATGATCAGGTTGACTGAGAAGCTATGA 1806 0.4673 MVREQTAVSFYNKMRESASKSSSTPLLIFPSTSDVDSLCALKIIFHILESDGLQYSCYPVSSFNEIYNYAGPTLASAAENGDYVSMLLINWGCHRDLQKTLNLPPSARIFVVDSHRPIHLNNISQENESVVVLFTDEDEKIADLVYSFDITLAELANASYMCRESNELEESEXDSDESDEEDSENSNDDEDQQGSRRKRRRVSDSDPVQFFKKQVKRYYKLGTFHGKPSGCLMYELADSLRKNTNELLWLSCVSLTDQFVHERLSDERYXDGVAELEDRIRCAGNLDVVTSVTLKDGTKIRAPHSCKIACEDEPRLMLLKEWSLFDSMLCSSYIATKLKTWSDNGVKKLNLLLARMGFALVDCQQKFQYMSMEVKKKMKHEFERFLPEYGLTDFYYRSFLRIHGYSSRVSAADVVYGVTALLESFVKSDGSCASKQFGVAYDALSLSNLDKLKAGMQHAIRIQRAILRQGSTAITKNGCIRSGRKFRWVKLEDSVDTKLLGYPQALTKFCYFLMDALREKGARMKPLLCACLSQEPNRMLIVGVYGKPRLAGAQGNAFGIAFRNAAEEIGAEFFHELFESSWILLDSSTVNSFMIRLTEKL* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1170 601 MobiDBLite consensus disorder prediction 164 200 - -
Amo11g1170 601 PANTHER CDC45-RELATED PROTEIN 1 601 IPR003874 GO:0006270
Amo11g1170 601 PANTHER - 1 601 - -
Amo11g1170 601 MobiDBLite consensus disorder prediction 169 188 - -
Amo11g1170 601 Pfam CDC45-like protein 429 600 IPR003874 GO:0006270
Amo11g1170 601 Pfam CDC45-like protein 27 424 IPR003874 GO:0006270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1170 Amo-Chr11 38215856 38217842 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1170 1 601 Core DNA Replication Machinery Family AT3G25100 70.481 0.0 856
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1170 K06628 - egr:104456527 909.442