Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1166 ATGGCATCATCGGAGGCAGTAACAACCATCAAGGTTAATGACGCGGAAGCTGCACTTTACAAGGAGCTAAGGCATGCGTGTGTGGAAGCGTCAACAAATCAGGTGGCTAACCAACACATGCCTGTGTACAATCTTCCTTCCAAGATCCTTTGTTGGGTCATCAATGTGCAGCTCAAGATAGCGGAGCCTGACATGGATAAGGTGTCTGCCCAGATTACCTTTCTTCCAGGAAGGTTTAGTGATTGTTGA 249 0.4739 MASSEAVTTIKVNDAEAALYKELRHACVEASTNQVANQHMPVYNLPSKILCWVINVQLKIAEPDMDKVSAQITFLPGRFSDC* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1166 82 PANTHER AUXIN RESPONSE FACTOR 2 28 78 - -
Amo11g1166 82 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 28 78 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1166 Amo-Chr11 37920078 37921116 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1166 3 76 B3 DNA Binding Superfamily AT5G62000 47.959 2.07e-19 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1166 - - aip:107612759 93.5893