Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1137 ATGAACTGTTTGTTCTTCAAGGAGAAGCGCAAGGAGAAGTGCAGGTCGGCACCGGAGCTGGAGCAGCAGAATCGAGGAGGGGCGAAGAAGAAGGATCCGGCTTTGAACCGCGCCACGAACTCCACCGGCTCCATACAATCGCCGAGGAGCGTGAAGGAATTGTACAAGGAGAAAGAGAAAGAGAGCAATTTCAGGGTTTTCACGTGGCAGGAGCTGAAAGATGCTACAAGCGGTTTCAACAAGATGCTCAAGATTGGCGAGGGAGGGTTTGGGAGTGTGTATAGAGGTTCCATTAGTCCTCCAGATGGAAAAGGTGAACCGATTGTTGTTGCCATCAAGAAGCTTAACCCACGTGGCTTCCAGGGTCATAAAGAATGGCTTGCGGAAGTTCAATTTCTAAGCATTGTTAGTCACCCAAATCTMGTTAAGCTTTTGGGATACTGCTCTGTGGARGGRGAAAGAGGGATCCAGCGGCTGTTGGTGTACGAGTTCATGCCCAACAGAAGCCTTGAAGATCACCTCTTCAGTAAAACTTTACCRCCTCTTACTTGGAAAACAAGATTGGAGATCATGCTTGGTGCTGCTCAAGGATTAGCGTATCTACATGAGGGGCTAGAGATTCAGGTGATATACCGAGATTTCAAGTCATCAAATGTTCTATTAGATGAGAATTTCCACCCAAAGCTTTCAGATTTCGGTCTTGCTAGGGAAGGTCCCCAAGGTGACCATACTCATGTCTCTACTGCAGTAGTTGGTACTCAGGGATATGCTGCTCCAGAGTACATTGAAACAGGTCACCTCAAAGTTCAGAGTGACATGTGGAGTTTTGGCGTTGTCCTCTACGAGATCATTACTGGAAGGCGATCGCTAGAAAGAAACCGTCCTACGCCGGAACAAAAGCTACTAGATTGGGTTAAACAACACCCTGCTGATAGCAACAGGTTCACAATGATAATCGATCCCCGTCTGAGGAACCAATATTCCCTCCCTGCGGCTCGCAAGGTAGCCAAGTTGGCCGACAGCTGCTTAAAGAAGAATCCTGAAGATAGACCAGCCATGAATCAAATAGTTGAGAGCCTGAAGCATGCATTGCAAATTTCAGAAATGACGAGCAGTTCGAGCAATGTTGGCGAATCGTCACGATCGAAATTGGGCCGAAAAGGTAAATAG 1170 0.4726 MNCLFFKEKRKEKCRSAPELEQQNRGGAKKKDPALNRATNSTGSIQSPRSVKELYKEKEKESNFRVFTWQELKDATSGFNKMLKIGEGGFGSVYRGSISPPDGKGEPIVVAIKKLNPRGFQGHKEWLAEVQFLSIVSHPNLVKLLGYCSVEGERGIQRLLVYEFMPNRSLEDHLFSKTLPPLTWKTRLEIMLGAAQGLAYLHEGLEIQVIYRDFKSSNVLLDENFHPKLSDFGLAREGPQGDHTHVSTAVVGTQGYAAPEYIETGHLKVQSDMWSFGVVLYEIITGRRSLERNRPTPEQKLLDWVKQHPADSNRFTMIIDPRLRNQYSLPAARKVAKLADSCLKKNPEDRPAMNQIVESLKHALQISEMTSSSSNVGESSRSKLGRKGK* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1137 389 PANTHER OS01G0588500 PROTEIN-RELATED 24 383 - -
Amo11g1137 389 MobiDBLite consensus disorder prediction 14 32 - -
Amo11g1137 389 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL20-RELATED 24 383 - -
Amo11g1137 389 Gene3D Transferase(Phosphotransferase) domain 1 165 383 - -
Amo11g1137 389 SUPERFAMILY Protein kinase-like (PK-like) 55 360 IPR011009 -
Amo11g1137 389 Pfam Protein tyrosine and serine/threonine kinase 83 360 IPR001245 GO:0004672|GO:0006468
Amo11g1137 389 ProSitePatterns Protein kinases ATP-binding region signature. 85 114 IPR017441 GO:0005524
Amo11g1137 389 MobiDBLite consensus disorder prediction 14 51 - -
Amo11g1137 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Amo11g1137 389 ProSiteProfiles Protein kinase domain profile. 79 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g1137 389 CDD STKc_IRAK 85 361 - -
Amo11g1137 389 Gene3D Phosphorylase Kinase; domain 1 50 164 - -
Amo11g1137 389 MobiDBLite consensus disorder prediction 368 389 - -
Amo11g1137 389 MobiDBLite consensus disorder prediction 35 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1137 Amo-Chr11 36308434 36311841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1137 1 360 Glycoside Hydrolase AT3G07070 41.848 3.18e-90 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Amo11g1137 PK_Tyr_Ser-Thr 6.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1137 - K00924 adu:107483795 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g1137 11 36308434 36311841 Amo11g1137 11 36308434 36311841 ECH
Amo05g0436 05 5028808 5031332 Amo11g1137 11 36308434 36311841 PCT
Amo11g1137 11 36308434 36311841 Amo05g0436 05 5028808 5031332 PCT