Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1103 ATGAAGAACACTTTTGCTCTTTGTTCTTATTTACTCCTCCTTGTTACCCTTTTGGGTCTAGTATTCTCAAATTGCAAAGCCAACCAAGTTGACAACCTTGATGAGTTGATTAATTCAAGAAGCTCAGAGAATGCTCCTAAGACTCTTTCATGGACAAAAGAAGATGCATACATACCAAAATATTATCATACTTCTTCTATTGGTCCATCTCCATCACAAGAGGAGCAAAAGTTGGCTGATAAAATAACTGCATTGCCAGGTCAACCATATTATGGGTCAAATTTTGACCAATATGCAGGGTATGTTACTGTTGATCCAAATGTTGGGAGAGATCTTTTCTATTATTTTGTGGAGTCTCCAGCTAATTCCTCTCAGTACAACCCTTTGGTTTTGTGGCTCAATGGAGTGGCTAATGTTCTGTTCTTGGAATCCCCTGCTGGAGTGGGATTCTCGTACACACAAAATGACTCACAAACATTTTTCCCTACTTCCGGTGACAAGGCTGCTGCAAAGGATGCCTACGTGTTCCTGGTTAACTGGCTAGACCGGTTTCCAGAGTACAAAGACCGTGAAATTTACATCACTGGCGAGAGCTATGCCGGTCACTATGTGCCTCAGCTTGCATATACTATTGTTGTCAACAATCTTTTCAGACAAATTGCCAACCAATCTGTTATCAACCTTCAAGGCATTGCTATTGGGAACCCATGGGTTGATGATTTTACTGGTGTAAAGGGGTTATTTGATTACCTCTGGACTCATGCTTTGAACTCAGACCAAACTCATGAGCTCATTGAGACATACTGTGACTTCAAACCCCATCAACCCATTTCCTCTATTTGTATCAATGCAACAAGAAATGCCTTCGCTGAGAAAGGACCCATTGACTCCTATAATATATACGCACCACTCTGTCACGACACCTCTCTCAAACCTTCTCAAACTGGCTCTGTATACAATTTCGACCCATGCTCTGATGTGTACGTGCAAGCCTATCTAAATAGGCCAGAGGTCCAAGAAGCTCTTCATGCAAAACCCACACAATGGAGCCACTGCAGTGGTGATGTAGATTCAAGAGTGTCAGTCACAGCTACCAGATATGCACTCAACGTCCTCAAGCTCCCTATTGTGACCCCTTGGTATCCATGGTATTCTGAAAACGAGATTGGAGGATATGCGGTGCAATACAAAGGATTGGTATTTGCGACAGTGAGAGGAGCAGGGCATATGGTTCCAAGCTGGCAGCCAGAACGGGCTTTCAACTTGATCTTAGCATTCCTCAGTGGATATCCCTCCCCTCCTGGTTCACCAAAATGA 1317 0.432 MKNTFALCSYLLLLVTLLGLVFSNCKANQVDNLDELINSRSSENAPKTLSWTKEDAYIPKYYHTSSIGPSPSQEEQKLADKITALPGQPYYGSNFDQYAGYVTVDPNVGRDLFYYFVESPANSSQYNPLVLWLNGVANVLFLESPAGVGFSYTQNDSQTFFPTSGDKAAAKDAYVFLVNWLDRFPEYKDREIYITGESYAGHYVPQLAYTIVVNNLFRQIANQSVINLQGIAIGNPWVDDFTGVKGLFDYLWTHALNSDQTHELIETYCDFKPHQPISSICINATRNAFAEKGPIDSYNIYAPLCHDTSLKPSQTGSVYNFDPCSDVYVQAYLNRPEVQEALHAKPTQWSHCSGDVDSRVSVTATRYALNVLKLPIVTPWYPWYSENEIGGYAVQYKGLVFATVRGAGHMVPSWQPERAFNLILAFLSGYPSPPGSPK* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1103 438 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 21 135 IPR001563 GO:0004185|GO:0006508
Amo11g1103 438 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 353 432 IPR001563 GO:0004185|GO:0006508
Amo11g1103 438 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 134 353 IPR001563 GO:0004185|GO:0006508
Amo11g1103 438 SUPERFAMILY alpha/beta-Hydrolases 85 431 IPR029058 -
Amo11g1103 438 Pfam Serine carboxypeptidase 136 356 IPR001563 GO:0004185|GO:0006508
Amo11g1103 438 Pfam Serine carboxypeptidase 93 135 IPR001563 GO:0004185|GO:0006508
Amo11g1103 438 Gene3D alpha/beta hydrolase 136 307 IPR029058 -
Amo11g1103 438 ProSitePatterns Serine carboxypeptidases, histidine active site. 399 416 IPR033124 GO:0004185
Amo11g1103 438 Gene3D - 324 354 - -
Amo11g1103 438 PANTHER CARBOXYPEPTIDASE 353 432 - -
Amo11g1103 438 PANTHER CARBOXYPEPTIDASE 134 353 - -
Amo11g1103 438 PANTHER CARBOXYPEPTIDASE 21 135 - -
Amo11g1103 438 ProSitePatterns Serine carboxypeptidases, serine active site. 194 201 IPR018202 GO:0004185
Amo11g1103 438 PRINTS Carboxypeptidase C serine protease (S10) family signature 142 152 IPR001563 GO:0004185|GO:0006508
Amo11g1103 438 PRINTS Carboxypeptidase C serine protease (S10) family signature 180 205 IPR001563 GO:0004185|GO:0006508
Amo11g1103 438 PRINTS Carboxypeptidase C serine protease (S10) family signature 399 412 IPR001563 GO:0004185|GO:0006508
Amo11g1103 438 Gene3D - 355 431 - -
Amo11g1103 438 Gene3D alpha/beta hydrolase 73 135 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1103 Amo-Chr11 33730491 33737574 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1103 353 431 Calmodulin-binding Proteins AT2G22960 35.000 1.89e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1103 K16297 - gmx:100779407 534.258