Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1102 ATGGAACCGTCAGGATTCCAGAGAACTCTTATGAGCAATAGCATGGAACCTAGAAATGAATTCCACCATGGATCACACTCAGTAACACATGACCGTATGGATGGCAGTAATACTAACAGAAGACCACCTGACCTCAATAAATCAGAAGTTAAACCTGTACTTAATTACTCCATTCAGACGGGTGAGGAATTTGCACTTGAATTTATGAGAGATAGGGTGAATCTTGGGAAACCTGTATTTTCAAATGTTGGTGATTCCAATTATACAACGGGATATATGGAGCTGCAAGGCATGTTAGGCATTGGTCATGCTGGATCTGGAAGTGGATCAGACATCTCTATGCTCTCAGTGGTTGACAAATATCCAAAAGAGTTTGATAAAATAAACACATCAATATATGGGGACAGAAGTAATTATGGGTCCATTCGATCAATACCAACTACTTCCTTGAATCAAGACAATAGACAATTTGTGCATAGATATGGCTCTTCTCGAGGTTATGATAGCTCATTGTTGATGATGAAGTTTCTTTGCAGCTTTGGTGGTAGAATATTACCACGACCTAGTGATGGAAAGCTAAGGTATGTTGGAGGTGATACACGTATTCTTCGCATAAGAAAGGACATTACTTGGCAGGAGCTTATGCATAAAGCATTGTTAATCTATAGTCAGGTTCAAGTAATCAAGTATCAGCTTCCTGGGGAAGATCTTGATGCTCTGGTATCGGTATCATCTGATGAGGATTTGCAGAATATGATGGAGGAATGCACTCATCTACAAGATAGAGAAGGAACGCAGAAGCTTAGGATGTTTTTGTTCTCAATCAGTGATTTGGAGGATGCTCAGTTTGGTCTTGGTAGCATGGGGGATGATTCTGAGGTCCAGTATGTTGTTGCTGTTAATGGAATGGACTTGGGATCGAGGAGAAACTCAACCCTGATTGGTGTCGGCTTTTCAGCAGATGTTGTGCATGAATTGGATGGACAAACTATTGAGAGGGAGACCAATAGAGTTGCTGTAGAATCTGAAGGTGTTAGCAATGTTCCCTTGACTAACAAATTTGACTTGTCTTTGAATAGTCAGTCTTCGCAACCAGTGCTATCCACGGCCCCAAATTCCTATGAAACCTATCCTCTGTTTCACAGTGACCAAATGATGCACCATGAGGAGGCGAGAGGTCAATATGGCCTTAATCCTGCTTATATGCCTGTTGTTGGAGAGACTCCTATTACAATGCCCACTACCCAGGTGGTTATTAATCCACAAGGGGTTTTGAACGACATCTATCCACCTAGTGGATTACAAGTCCAAAGTCCAGAAATACCTACAACTCTGATGGCAAATACTTCAATTCAACAAGGAAGCGACCCTGGGAAAGCTTTCTCATTAGAAACACCACTTCCAGCTCCTGTGCAACTGTTTGATGGTTACCCAAAAAATAATCTTCCTGAAGCATCAGTTGCAGTTAATGTGCCAGAGGGGTATTCATTGCCTCCAACTAAAAAGGACCAGCTTCAGGATGATGAAGTGGCTTCGTGTACTTCTAGGAGCACCTTTGGTCCAACTTACGTTGATTCTCACTCCAATGCAGTTGACTTGAGTTGTCTTCACCCTCCTCCTCTTCCCAAAAGAGTTTACTATTCAGAAAGAATTCCAAGGGAGCAAATAGAGTTGCTGAATCGGTCTTCAAAGTCAGATGATGCACATGGTTCTCAGTTTAATGTGTCAGAATTACTTTCTGAAGTTAACCCGACAGAATCACTGACAGAATCTGGTGAAAACTTGCATGATGGAAATCTGTCTAATGTAACTGAGTATTCGAAGGTCGTAGCAAAGCCCTTGCAATCAGACGGCATTACAATTGATAATGGGGCTGTTAAACATCAAAAGCAATTGCCTGATGCAAGCGGACAGCTAAAGTCAAAGTTGAGTGAGCATGTAAAGCCCGAGTTGAAGCAGGTGTTGGCAAATAGTGAAGGAAGCATAGATGCAATAAATAAGGATAACGTTCTTAAGTTGGAAAGTGAAATTAACAGTAAAGATAACCATAACAAAGCCCTGCTTGGTGAGAAGCAGGGCAGTAAGTCAGACTTAACTACTTTGCAACAGGTTCCTTCTGTTAAGCAGCTTGAGGATCCAGCATCAAATCTTCCAGATATCGATTGGGGTGGTGTTTCTGTGAAGGACTCTAAGGATGATTCTGTTGTGCAAGGATTGCCTGTTTCTGTAAATGGGAATGCTACGACCAATGGTGATTCACAGCATTATCCTTCAAATGTTTCCAAAGAAGGACAAGGTGACATTCTTATTGATATTGATGATCGATTTCCCCGTGAATTGCTTACAGATATGTATTCTAAAGCTTTACTGGAAGAAAGTTCCTCTGGTCGGCATCCTTTAACCTCAGATGGAGTGGGTCTAAGCATAAACATGGAAAATCATGAACCTAAACATTGGTCATATTTTCATAAACTGGCACAAGAAGGGTTAGATAATGTGTCCCTTATTGACCAGGATCATGGTTTTTCAGGTGAGATGGGAAAGGTGGAAGAAGATAATAGAACTCAACATGTTACACCTCTACCAGCTGAAGAAAAATATCAGAATGATTTAGATGGAAGAATTGGAACAGAAACGGCTGTTCCTGAGTCAAACTATGATCATTCCCAATTGAATGACGCTGAAAGTATGCAGTTTGATGCTATGATGGAAAATGCAAGGGCACAAGAATCAGAATTTGAGGATGCATTGGTTGAAGCAAGAAAGAGTGCTCTGCCTCCGCTTGATCCTTCTTTAGGGGATATTGATATGAGTGGCGTGCAGGTAATAATGAATGAAGATCTTGAAGAGCTTAAGGAACTGGGTTCTGGTACCTTCGGGACTGTGTATCATGGAAAATGGCGAGGAACTGATGTCGCAATTAAAAGAATAAAGAAAAGCTGTTTCACTGGTCGTTCATCTGAGCAAGAGAGACTGACTGTAGAATTCTGGCGGGAAGCTGACATTCTTTCCAAGCTTCATCATCCAAATGTGGTAGCATTTTATGGTGTAGTCCAGGATGGACCAGGTGGAACGATGGCCACTGTTACAGAGTTCATGGTGGATGGTTCCCTTAGGCATGTATTACTTCGTAAGGATAGGTATCTTGATCGTCGCAAGAGACTGATTATTGCAATGGATGCAGCTTTTGGAATGGAATATTTGCACTCAAAGAATATTGTGCATTTTGACTTAAAATGTGATAATTTGCTTGTTAACTTAAAAGATCCTTTAAGGCCAATATGCAAGGTTGGTGATTTTGGCTTGTCAAAAATCAAACGAAACACATTGGTGTCTGGTGGGGTACGGGGGACTCTACCCTGGATGGCACCGGAGCTCCTGAACGGTAGCAGCAACAAGGTCTCAGAAAAGGTTGACGTGTTTTCATTTGGCATTGTATTATGGGAGATTCTAACGGGCGAGGAGCCATATGCAAATATGCACTATGGTGCAATTATAGGTGGAATTGTGAATAACACATTGAGGCCAACAATTCCAAGTTATTGTGATAATGAATGGAGAACACTGATGGAGCAATGTTGGGCGCCTAACCCTGCAGCTCGGCCTTCCTTCACTGAAATTGCGAGTCGGCTGCGTGTAATGTCGGCAGCAGCTAGCCAAACCAAAACACAGGGCCACAAGGCTTCTAAGTGA 3693 0.4192 MEPSGFQRTLMSNSMEPRNEFHHGSHSVTHDRMDGSNTNRRPPDLNKSEVKPVLNYSIQTGEEFALEFMRDRVNLGKPVFSNVGDSNYTTGYMELQGMLGIGHAGSGSGSDISMLSVVDKYPKEFDKINTSIYGDRSNYGSIRSIPTTSLNQDNRQFVHRYGSSRGYDSSLLMMKFLCSFGGRILPRPSDGKLRYVGGDTRILRIRKDITWQELMHKALLIYSQVQVIKYQLPGEDLDALVSVSSDEDLQNMMEECTHLQDREGTQKLRMFLFSISDLEDAQFGLGSMGDDSEVQYVVAVNGMDLGSRRNSTLIGVGFSADVVHELDGQTIERETNRVAVESEGVSNVPLTNKFDLSLNSQSSQPVLSTAPNSYETYPLFHSDQMMHHEEARGQYGLNPAYMPVVGETPITMPTTQVVINPQGVLNDIYPPSGLQVQSPEIPTTLMANTSIQQGSDPGKAFSLETPLPAPVQLFDGYPKNNLPEASVAVNVPEGYSLPPTKKDQLQDDEVASCTSRSTFGPTYVDSHSNAVDLSCLHPPPLPKRVYYSERIPREQIELLNRSSKSDDAHGSQFNVSELLSEVNPTESLTESGENLHDGNLSNVTEYSKVVAKPLQSDGITIDNGAVKHQKQLPDASGQLKSKLSEHVKPELKQVLANSEGSIDAINKDNVLKLESEINSKDNHNKALLGEKQGSKSDLTTLQQVPSVKQLEDPASNLPDIDWGGVSVKDSKDDSVVQGLPVSVNGNATTNGDSQHYPSNVSKEGQGDILIDIDDRFPRELLTDMYSKALLEESSSGRHPLTSDGVGLSINMENHEPKHWSYFHKLAQEGLDNVSLIDQDHGFSGEMGKVEEDNRTQHVTPLPAEEKYQNDLDGRIGTETAVPESNYDHSQLNDAESMQFDAMMENARAQESEFEDALVEARKSALPPLDPSLGDIDMSGVQVIMNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDNEWRTLMEQCWAPNPAARPSFTEIASRLRVMSAAASQTKTQGHKASK* 1231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1102 1230 MobiDBLite consensus disorder prediction 16 50 - -
Amo11g1102 1230 MobiDBLite consensus disorder prediction 705 724 - -
Amo11g1102 1230 SMART serkin_6 948 1214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g1102 1230 Gene3D - 192 275 - -
Amo11g1102 1230 ProSiteProfiles Protein kinase domain profile. 948 1213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g1102 1230 SUPERFAMILY Protein kinase-like (PK-like) 940 1210 IPR011009 -
Amo11g1102 1230 Pfam Protein tyrosine and serine/threonine kinase 949 1211 IPR001245 GO:0004672|GO:0006468
Amo11g1102 1230 CDD PB1_UP2 177 273 - -
Amo11g1102 1230 PRINTS Tyrosine kinase catalytic domain signature 1030 1043 IPR001245 GO:0004672|GO:0006468
Amo11g1102 1230 PRINTS Tyrosine kinase catalytic domain signature 1182 1204 IPR001245 GO:0004672|GO:0006468
Amo11g1102 1230 PRINTS Tyrosine kinase catalytic domain signature 1138 1160 IPR001245 GO:0004672|GO:0006468
Amo11g1102 1230 PRINTS Tyrosine kinase catalytic domain signature 1067 1085 IPR001245 GO:0004672|GO:0006468
Amo11g1102 1230 PANTHER SERINE-THREONINE PROTEIN KINASE 87 1230 - -
Amo11g1102 1230 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1073 1085 IPR008271 GO:0004672|GO:0006468
Amo11g1102 1230 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 87 1230 - -
Amo11g1102 1230 MobiDBLite consensus disorder prediction 743 762 - -
Amo11g1102 1230 MobiDBLite consensus disorder prediction 743 761 - -
Amo11g1102 1230 Pfam PB1 domain 190 273 IPR000270 GO:0005515
Amo11g1102 1230 Gene3D Transferase(Phosphotransferase) domain 1 1036 1230 - -
Amo11g1102 1230 SUPERFAMILY CAD & PB1 domains 189 277 - -
Amo11g1102 1230 SMART PB1_new 188 275 IPR000270 GO:0005515
Amo11g1102 1230 Gene3D Phosphorylase Kinase; domain 1 941 1035 - -
Amo11g1102 1230 Coils Coil 903 923 - -
Amo11g1102 1230 CDD STKc_MAP3K-like 954 1211 - -
Amo11g1102 1230 MobiDBLite consensus disorder prediction 19 38 - -
Amo11g1102 1230 ProSitePatterns Protein kinases ATP-binding region signature. 954 979 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1102 Amo-Chr11 33279280 33287150 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1102 3 627 MAP Kinase Kinase Kinase AT1G16270 38.182 2.49e-95 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Amo11g1102 PK_Tyr_Ser-Thr 1.3e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1102 - - gmx:100799639 1761.5