Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1083 ATGGGGTGTTTACATTCAAAAACCGCTCATCTTCAATCTCCTGAAGACCCTCCCACTGACTTACCAGACCCCAACAAGCCCGATCCAGGTGATGGGGTTGGTGGTGATGATGGTGGAGAGAGTGAGGTTCCGGCATTCAAAGAGTATAGTTTAAGTGAACTGAGAAGGGCGACAAATGAGTTCAACGCAAAGAACATAGTTTCAGAGAGTGGAGAGAAAGCTCCGAACGTTGTGTACAAAGGGAAGCTTGAGAACAATCGCTTCGTTGCTGTTAAGCGTTTCTCCAAACTTTCTTGGCCTGATGCTCAGCAGTTCATGGTAGAGGCTGCTGGAGTTGGGAAAGTGAGGCACAAGAGACTGGTGAATCTAATTGGCTGTTGCGCCGAAGGAGATGAGCGGCTCTTGGTAGCCGAGTTTATGCCAAATGATACTTTGTCAAAGCATCTCTTTCATTGGGATAAGCAACCGTTACCATGGGAAATGCGTGTTAGAGTTGCATACCATGTTGCTCAGGCATTGGATCATTGTAGCAACGAAAACCGGAAAATATATCATGATCTGAATGCCTATAGGATTCTCTTCGATGAGGATGGTGATCCCCGTTTATCTAGTTTTGGGCTTATGAAAAATAGTCGAGATGGAAAAAGCTACAGTACTAACTTAGCATATACCCCACCTGAATTTTTGCGAACAGGTAGGATAATCCCTGAGAGTGTGATTTACAGTTATGGAACTGTTCTTCTGGATCTTTTGAGCGGCAAGCATATTCCTCCGAGCCATGCACTAGACCTAATTAGAGGGAAAAATGTATTGATGTTGATGGACTCGTCCCTCGAAGGGCAATATGCAAATGATGATGCTACAAAGTTGGTTGAGCTTGCTTCAAAGTGTCTTCAGTTTGAGGCTAGAGAACGACCCGATATCAATTTTCTTCTTACTGCAGTTACACCCCTTCAGAAGCAGAAAGAGGTAGCATCACATGTGTTAATGGGCCTTACAGTGAATAATACACCGGTGCTTCCGACCATACTTTCTCCCCTTGGAAAGGCATGTGCGAGAATGGATCTTACTGCGGTGCATGATATATTGTTAAAAACTGGTTATAAAGACGAAGAAGGTGCAGAAAATGAGCTTTCTTTCCAAGAGTGGACACAACAAGTGCAAGATATATTGAACACAAAAAAGTTTGGGGATATTGCATTTAGAGACAAGGACTTCAAAAATGCAATTGAGTATTATTCTAAGTTGGTGGTTATGATGTCGGTTCCTTCTGCAACCGTCTTTGCAAGGAGATCCTTCTCCTACTTAATGAACGATCAGGCGGAACTTGCGTTACGCGACGCCATGCAGGCGCAGGTGTGCATATGTGATTGGCCAACTGCGTTCTACCTGCAGGCTCTCGCGCTCTCAAAGCTGGGAATGGACACAGATGCTCAGGACATGCTTAATGATGGAGCAGCCTTTGAAGCCAAGAGGTCTAACAGTTGGCGTGGCTAG 1497 0.4482 MGCLHSKTAHLQSPEDPPTDLPDPNKPDPGDGVGGDDGGESEVPAFKEYSLSELRRATNEFNAKNIVSESGEKAPNVVYKGKLENNRFVAVKRFSKLSWPDAQQFMVEAAGVGKVRHKRLVNLIGCCAEGDERLLVAEFMPNDTLSKHLFHWDKQPLPWEMRVRVAYHVAQALDHCSNENRKIYHDLNAYRILFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRIIPESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNVLMLMDSSLEGQYANDDATKLVELASKCLQFEARERPDINFLLTAVTPLQKQKEVASHVLMGLTVNNTPVLPTILSPLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDILNTKKFGDIAFRDKDFKNAIEYYSKLVVMMSVPSATVFARRSFSYLMNDQAELALRDAMQAQVCICDWPTAFYLQALALSKLGMDTDAQDMLNDGAAFEAKRSNSWRG* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1083 498 Gene3D Tetratricopeptide repeat domain 388 497 IPR011990 GO:0005515
Amo11g1083 498 ProSiteProfiles Protein kinase domain profile. 64 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g1083 498 SUPERFAMILY TPR-like 392 493 IPR011990 GO:0005515
Amo11g1083 498 Gene3D Transferase(Phosphotransferase) domain 1 141 333 - -
Amo11g1083 498 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK2 1 497 - -
Amo11g1083 498 SUPERFAMILY Protein kinase-like (PK-like) 43 316 IPR011009 -
Amo11g1083 498 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 497 IPR045845 GO:0004672|GO:0009742
Amo11g1083 498 Gene3D Phosphorylase Kinase; domain 1 37 139 - -
Amo11g1083 498 MobiDBLite consensus disorder prediction 1 44 - -
Amo11g1083 498 Pfam Protein tyrosine and serine/threonine kinase 77 312 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1083 Amo-Chr11 32353980 32359906 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1083 45 315 Glycoside Hydrolase AT3G07070 34.694 8.98e-42 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Amo11g1083 PK_Tyr_Ser-Thr 2.6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1083 K14500 - gmx:100793576 899.427