Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1016 ATGCGCTTCTTTCGTAGAGATGGCCATAACTGGCACAAGAAGAAAGACGAAAGGACTGTCGGAGAGGCACACGAACGCCTTAAGGTTGGAACTATCGAAGCCTTAAATTGTTACTATGCACATGGAGAGCAGAACCCTACTTTCCAGAGGCGGAGCTATTGGATGTTGGATCTGGCATATGAGCATATTATTCTTGTGCATTATAGAACAACAAGTGAGGTGAAAGCTAAAGAAACTAAGAGCAAGAAAGTTGGCATGGCTATAAATGTTGATTATGGTGGAGTAGTTGTGGCTGTGGAATCACTGAGTTCTGCTTTGGAGACACTGAAGGATGGGGTTTTGAATGAAGCTGAGACTTGA 360 0.4361 MRFFRRDGHNWHKKKDERTVGEAHERLKVGTIEALNCYYAHGEQNPTFQRRSYWMLDLAYEHIILVHYRTTSEVKAKETKSKKVGMAINVDYGGVVVAVESLSSALETLKDGVLNEAET* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1016 119 SMART CG_1_2 1 72 IPR005559 GO:0003677
Amo11g1016 119 Pfam CG-1 domain 1 70 IPR005559 GO:0003677
Amo11g1016 119 Coils Coil 110 119 - -
Amo11g1016 119 ProSiteProfiles CG-1 DNA-binding domain profile. 1 77 IPR005559 GO:0003677
Amo11g1016 119 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 2 83 - -
Amo11g1016 119 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 4 2 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1016 Amo-Chr11 29500293 29501511 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1016 1 73 CAMTA Transcription Factor Family AT1G67310 71.233 5.80e-36 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1016 K21596 - aip:107617302 162.925