Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g1006 ATGGCCATAAGGCCCTTCCAGTTCCAACAGACCTCCTTCTCCTTCTCCCTCTCGCGCGACGCGTTGCTTTCTCTCTTCCGTACTCCTCCTTCCCTTCGCTATCCCAACCTACCGCGAGCTCTTCCTCTCCTCTTCTTTCTCACCCGCTTCACCTCACGCGCCGCCGCCTCTACCTTCCGTCGCCCTCCGCCAGCACTCGCCGCCGCCGAAACCCTGGCACAAAAGATTGGCAAATCGACGCGCCGCCCCGGCGCGTCGTCCAAGGCAAGGGTTTACGCCGACGTCAACGTCGTTCGCCCTAAAGAATATTGGGACTACGAAACCCTCAACGTCCAGTGGGGGGAGCAAGATGATTATGAGGTGGTGAGGAAGGTGGGAAGAGGGAAATACAGTGAGGTGTTTGAGGGTGTTCACTGCACCGATAACGAAAAATGCGTCATAAAGATCCTGAAGCCTGTGAAGAAGAAGAAGATCAAGAGGGAAATCAAAATTTTACAGAATCTTTGTGGGGGGCCCAATATTGTAAAGTTGCTCGACATTGTTAGAGACCAGCAGTCAAAGACCCCAAGCCTTATATTTGAATATGTTAATAACACTGATTTTAAAGTGCTTTATCCCACATTGTCGGACTATGATATAAGATATTACATCTATGAACTTTTAAAGGCACTAGATTACTGCCACTCTCAAGGAATTATGCATCGGGATGTAAAGCCACATAATGTGATGATTGACCATGAGCAGCGAAAACTTAGGCTTATAGATTGGGGGCTTGCAGAGTTTTATCATCCTGGGAAAGAATATAATGTTCGCGTTGCGTCCAGATATTTCAAAGGCCCCGAGCTTCTTGTTGATCTTCAAGACTACGATTATTCTCTTGATTTATGGAGTCTTGGTTGTATGTTTGCTGGAATGATATTCCGGAAGGAGCCATTCTTTTATGGACATGATAACTATGATCAACTGGTCAAAATAGCGAAGGTACTCGGTACAGATGAATTAAGTGCATATTTAAATAAGTATCGCATAGAGTTGGACCCACATCTTGCAGCGCTTGTTGGGAGGCATAGCCGAAAGCCATGGACAAAGTTCATTAGTGTAGAAAATCAACACTTGGCTGTTCCTGAGGCTATTGACTTTGTGGACAAGCTACTACGGTATGATCACCAAGAACGTCCAACTGCAAAAGAAGCCATGGCCCATCCTTACTTCAACCCAGTCAGAAATGCCGAAAGTAGTAGAAATCGAACAGATTGA 1257 0.4638 MAIRPFQFQQTSFSFSLSRDALLSLFRTPPSLRYPNLPRALPLLFFLTRFTSRAAASTFRRPPPALAAAETLAQKIGKSTRRPGASSKARVYADVNVVRPKEYWDYETLNVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEKCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELSAYLNKYRIELDPHLAALVGRHSRKPWTKFISVENQHLAVPEAIDFVDKLLRYDHQERPTAKEAMAHPYFNPVRNAESSRNRTD* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g1006 418 ProSiteProfiles Protein kinase domain profile. 119 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g1006 418 PANTHER BNAA04G13490D PROTEIN 53 410 - -
Amo11g1006 418 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Amo11g1006 418 SUPERFAMILY Protein kinase-like (PK-like) 90 408 IPR011009 -
Amo11g1006 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Amo11g1006 418 Pfam Protein kinase domain 119 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g1006 418 Gene3D Transferase(Phosphotransferase) domain 1 196 404 - -
Amo11g1006 418 CDD STKc_CK2_alpha 100 404 IPR045216 GO:0004674|GO:0006468
Amo11g1006 418 SMART serkin_6 119 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo11g1006 418 Gene3D Phosphorylase Kinase; domain 1 119 195 - -
Amo11g1006 418 PANTHER CASEIN KINASE II SUBUNIT ALPHA 53 410 IPR045216 GO:0004674|GO:0006468
Amo11g1006 418 MobiDBLite consensus disorder prediction 398 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g1006 Amo-Chr11 29222710 29229731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo11g1006 117 405 Core Cell Cycle Gene Families AT1G76540 31.310 1.00e-41 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Amo11g1006 Pkinase 3.6e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g1006 K03097 - gmx:100776388 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g1006 11 29222710 29229731 Amo11g1006 11 29222710 29229731 ECH